GSVIVT01000179001


Description : WD40 repeat-containing protein HOS15 OS=Arabidopsis thaliana


Gene families : OG0003435 (Archaeplastida) Phylogenetic Tree(s): OG0003435_tree ,
OG_05_0004300 (LandPlants) Phylogenetic Tree(s): OG_05_0004300_tree ,
OG_06_0004015 (SeedPlants) Phylogenetic Tree(s): OG_06_0004015_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000179001
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Cre12.g527500 No alias WD40 repeat-containing protein HOS15 OS=Arabidopsis thaliana 0.05 Archaeplastida
LOC_Os07g22220.1 No alias component HOS15 of HDA9-PWR deacetylation complex 0.06 Archaeplastida
MA_57003g0010 No alias component HOS15 of HDA9-PWR deacetylation complex 0.03 Archaeplastida
Solyc04g078320.4.1 No alias component HOS15 of HDA9-PWR deacetylation complex 0.02 Archaeplastida
Zm00001e008690_P001 No alias component HOS15 of HDA9-PWR deacetylation complex 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 436 464
IPR001680 WD40_repeat 593 639
IPR001680 WD40_repeat 469 505
IPR001680 WD40_repeat 370 404
IPR001680 WD40_repeat 643 681
IPR001680 WD40_repeat 551 588
IPR006594 LisH 8 33
No external refs found!