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  5. GSVIVT01000266001

GSVIVT01000266001


Description : Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT3 gamma subunit


Gene families : OG0003845 (Archaeplastida) Phylogenetic Tree(s): OG0003845_tree ,
OG_05_0004402 (LandPlants) Phylogenetic Tree(s): OG_05_0004402_tree ,
OG_06_0005436 (SeedPlants) Phylogenetic Tree(s): OG_06_0005436_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000266001
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00176500 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 Archaeplastida
AT5G26360 No alias TCP-1/cpn60 chaperonin family protein 0.09 Archaeplastida
Cpa|evm.model.tig00000615.79 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 Archaeplastida
Cre10.g443250 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 Archaeplastida
LOC_Os02g14929.1 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.05 Archaeplastida
LOC_Os06g34690.1 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.07 Archaeplastida
MA_37504g0010 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.04 Archaeplastida
Mp7g14360.1 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.04 Archaeplastida
Pp3c10_13240V3.1 No alias TCP-1/cpn60 chaperonin family protein 0.06 Archaeplastida
Pp3c12_7550V3.1 No alias TCP-1/cpn60 chaperonin family protein 0.03 Archaeplastida
Solyc05g056310.3.1 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.07 Archaeplastida
Zm00001e000822_P001 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.06 Archaeplastida
Zm00001e024916_P001 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
CC GO:0070652 HAUS complex IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 31 524
No external refs found!