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  5. AMTR_s00033p00218820

AMTR_s00033p00218820 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00033.198

Description : Cell cycle.cytokinesis.preprophase microtubule organization.SABRE microtubule orientation-stabilizing factor


Gene families : OG0002914 (Archaeplastida) Phylogenetic Tree(s): OG0002914_tree ,
OG_05_0004076 (LandPlants) Phylogenetic Tree(s): OG_05_0004076_tree ,
OG_06_0003924 (SeedPlants) Phylogenetic Tree(s): OG_06_0003924_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00033p00218820
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT1G58250 SAB Golgi-body localisation protein domain ;RNA pol II... 0.04 Archaeplastida
GSVIVT01009199001 No alias Cell cycle.cytokinesis.preprophase microtubule... 0.02 Archaeplastida
Gb_21610 No alias microtubule orientation-stabilizing factor (SABRE) 0.03 Archaeplastida
MA_10435339g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_54574g0010 No alias Protein SABRE OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c12_12980V3.1 No alias Golgi-body localisation protein domain ;RNA pol II... 0.04 Archaeplastida
Zm00001e005147_P002 No alias microtubule orientation-stabilizing factor (SABRE) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR019443 FMP27_C 1967 2529
IPR019441 FMP27_GFWDK_dom 1312 1347
No external refs found!