1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01000485001

GSVIVT01000485001


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL18a component


Gene families : OG0001762 (Archaeplastida) Phylogenetic Tree(s): OG0001762_tree ,
OG_05_0001750 (LandPlants) Phylogenetic Tree(s): OG_05_0001750_tree ,
OG_06_0001973 (SeedPlants) Phylogenetic Tree(s): OG_06_0001973_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000485001
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00234980 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 Archaeplastida
AT1G29965 No alias Ribosomal protein L18ae/LX family protein 0.05 Archaeplastida
AT2G34480 No alias Ribosomal protein L18ae/LX family protein 0.23 Archaeplastida
AT3G14600 No alias Ribosomal protein L18ae/LX family protein 0.21 Archaeplastida
Cpa|evm.model.tig00000615.59 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 Archaeplastida
Cre01.g047750 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 Archaeplastida
Gb_05341 No alias component RPL18a of LSU proteome component 0.09 Archaeplastida
LOC_Os01g47660.1 No alias component RPL18a of LSU proteome component 0.2 Archaeplastida
LOC_Os01g54870.1 No alias component RPL18a of LSU proteome component 0.13 Archaeplastida
LOC_Os05g49030.1 No alias component RPL18a of LSU proteome component 0.16 Archaeplastida
MA_12029g0010 No alias component RPL18a of LSU proteome component 0.16 Archaeplastida
Mp1g17730.1 No alias component RPL18a of LSU proteome component 0.23 Archaeplastida
Pp3c12_7770V3.1 No alias Ribosomal protein L18ae/LX family protein 0.22 Archaeplastida
Pp3c13_12320V3.1 No alias Ribosomal protein L18ae/LX family protein 0.03 Archaeplastida
Pp3c20_15150V3.1 No alias Ribosomal protein L18ae/LX family protein 0.18 Archaeplastida
Pp3c24_18790V3.1 No alias Ribosomal protein L18ae/LX family protein 0.03 Archaeplastida
Pp3c3_11250V3.1 No alias Ribosomal protein L18ae/LX family protein 0.13 Archaeplastida
Pp3c8_13880V3.1 No alias Ribosomal protein L18ae/LX family protein 0.12 Archaeplastida
Smo227198 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
Solyc02g070640.3.1 No alias component RPL18a of LSU proteome component 0.13 Archaeplastida
Solyc02g070650.2.1 No alias component RPL18a of LSU proteome component 0.09 Archaeplastida
Solyc06g065590.4.1 No alias component RPL18a of LSU proteome component 0.11 Archaeplastida
Solyc08g016180.3.1 No alias component RPL18a of LSU proteome component 0.17 Archaeplastida
Zm00001e020218_P001 No alias component RPL18a of LSU proteome component 0.17 Archaeplastida
Zm00001e026540_P001 No alias component RPL18a of LSU proteome component 0.16 Archaeplastida
Zm00001e028015_P002 No alias component RPL18a of LSU proteome component 0.2 Archaeplastida
Zm00001e032436_P001 No alias component RPL18a of LSU proteome component 0.21 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0030515 snoRNA binding IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
InterPro domains Description Start Stop
IPR023573 Ribosomal_L18a//L18Ae/LX 7 128
No external refs found!