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  5. GSVIVT01000554001

GSVIVT01000554001


Description : Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 OS=Arabidopsis thaliana


Gene families : OG0000159 (Archaeplastida) Phylogenetic Tree(s): OG0000159_tree ,
OG_05_0006542 (LandPlants) Phylogenetic Tree(s): OG_05_0006542_tree ,
OG_06_0007653 (SeedPlants) Phylogenetic Tree(s): OG_06_0007653_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000554001
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g23530.1 No alias Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
MF GO:0008252 nucleotidase activity IEP Neighborhood
MF GO:0008253 5'-nucleotidase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001650 Helicase_C 973 1102
IPR011709 DUF1605 1327 1403
IPR007502 Helicase-assoc_dom 1165 1289
IPR002241 Glyco_hydro_27 207 381
No external refs found!