1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01000580001

GSVIVT01000580001


Description : ABC transporter B family member 15 OS=Arabidopsis thaliana


Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0000720 (LandPlants) Phylogenetic Tree(s): OG_05_0000720_tree ,
OG_06_0000544 (SeedPlants) Phylogenetic Tree(s): OG_06_0000544_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000580001
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AT3G28360 PGP16 P-glycoprotein 16 0.03 Archaeplastida
GSVIVT01028256001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Gb_02469 No alias subfamily ABCB transporter 0.02 Archaeplastida
LOC_Os01g34970.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
LOC_Os02g21750.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
LOC_Os08g45030.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
Pp3c1_7215V3.1 No alias ATP binding cassette subfamily B19 0.02 Archaeplastida
Smo408755 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Solyc02g071350.3.1 No alias subfamily ABCB transporter 0.01 Archaeplastida
Solyc03g005860.4.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
Solyc11g067300.2.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
Solyc11g067310.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e020073_P001 No alias subfamily ABCB transporter 0.02 Archaeplastida
Zm00001e025063_P001 No alias subfamily ABCB transporter 0.02 Archaeplastida
Zm00001e028117_P001 No alias subfamily ABCB transporter 0.02 Archaeplastida
Zm00001e041760_P001 No alias auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 99 358
IPR003439 ABC_transporter-like 798 946
IPR003439 ABC_transporter-like 505 557
IPR003439 ABC_transporter-like 448 484
No external refs found!