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  5. GSVIVT01000649001

GSVIVT01000649001


Description : Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.GC6-type golgin


Gene families : OG0003143 (Archaeplastida) Phylogenetic Tree(s): OG0003143_tree ,
OG_05_0005786 (LandPlants) Phylogenetic Tree(s): OG_05_0005786_tree ,
OG_06_0007906 (SeedPlants) Phylogenetic Tree(s): OG_06_0007906_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000649001
Cluster HCCA: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020816.67 No alias Vesicle trafficking.target membrane tethering.Golgi... 0.03 Archaeplastida
Cre06.g271950 No alias Vesicle trafficking.target membrane tethering.Golgi... 0.03 Archaeplastida
LOC_Os12g35360.1 No alias golgin (GC6) 0.05 Archaeplastida
MA_428209g0010 No alias Golgin candidate 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_8748851g0010 No alias golgin (GC6) 0.02 Archaeplastida
Mp6g05640.1 No alias golgin (GC6) 0.04 Archaeplastida
Pp3c3_27420V3.1 No alias golgin candidate 6 0.07 Archaeplastida
Zm00001e006782_P001 No alias No annotation 0.01 Archaeplastida
Zm00001e018276_P001 No alias golgin (GC6) 0.03 Archaeplastida
Zm00001e018282_P001 No alias golgin (GC6) 0.08 Archaeplastida
Zm00001e039709_P004 No alias golgin (GC6) 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
MF GO:0008565 protein transporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004057 arginyltransferase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
BP GO:0016598 protein arginylation IEP Neighborhood
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030173 integral component of Golgi membrane IEP Neighborhood
CC GO:0030906 retromer, cargo-selective complex IEP Neighborhood
CC GO:0031228 intrinsic component of Golgi membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
InterPro domains Description Start Stop
IPR006953 Vesicle_Uso1_P115_head 364 676
IPR006955 Uso1_p115_C 781 904
No external refs found!