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  5. GSVIVT01000717001

GSVIVT01000717001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000051 (Archaeplastida) Phylogenetic Tree(s): OG0000051_tree ,
OG_05_0000521 (LandPlants) Phylogenetic Tree(s): OG_05_0000521_tree ,
OG_06_0000874 (SeedPlants) Phylogenetic Tree(s): OG_06_0000874_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000717001
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AT1G51140 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT1G68920 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT5G48560 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01007389001 No alias External stimuli response.light.UV-A/blue... 0.05 Archaeplastida
GSVIVT01031020001 No alias External stimuli response.light.UV-A/blue... 0.04 Archaeplastida
Gb_22201 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_36369 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
LOC_Os04g41229.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os09g25040.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_158362g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
MA_158850g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_42080g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
MA_9115341g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Pp3c21_14114V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Smo24892 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Solyc02g062690.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc03g113560.4.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc04g077480.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Solyc05g006650.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc06g072520.2.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Solyc06g083170.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Solyc09g065820.4.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e003624_P003 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Zm00001e018946_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e028489_P003 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Zm00001e032950_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e034528_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e037598_P001 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 138 182
No external refs found!