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  5. GSVIVT01000743001

GSVIVT01000743001


Description : Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbW


Gene families : OG0005301 (Archaeplastida) Phylogenetic Tree(s): OG0005301_tree ,
OG_05_0004077 (LandPlants) Phylogenetic Tree(s): OG_05_0004077_tree ,
OG_06_0004960 (SeedPlants) Phylogenetic Tree(s): OG_06_0004960_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000743001
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00266120 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.11 Archaeplastida
AT2G30570 PSBW photosystem II reaction center W 0.19 Archaeplastida
Gb_40726 No alias component PsbW of PS-II complex 0.06 Archaeplastida
LOC_Os01g56680.2 No alias component PsbW of PS-II complex 0.13 Archaeplastida
LOC_Os05g43310.1 No alias component PsbW of PS-II complex 0.08 Archaeplastida
MA_10431532g0010 No alias component PsbW of PS-II complex 0.06 Archaeplastida
Mp5g14190.1 No alias component PsbW of PS-II complex 0.18 Archaeplastida
Pp3c18_6770V3.1 No alias photosystem II reaction center W 0.2 Archaeplastida
Pp3c18_6780V3.1 No alias photosystem II reaction center W 0.14 Archaeplastida
Pp3c22_16160V3.1 No alias photosystem II reaction center W 0.02 Archaeplastida
Pp3c22_16330V3.1 No alias photosystem II reaction center W 0.2 Archaeplastida
Solyc06g084050.4.1 No alias component PsbW of PS-II complex 0.13 Archaeplastida
Solyc09g065910.3.1 No alias component PsbW of PS-II complex 0.03 Archaeplastida
Zm00001e019660_P002 No alias component PsbW of PS-II complex 0.08 Archaeplastida
Zm00001e027386_P002 No alias component PsbW of PS-II complex 0.16 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Neighborhood
MF GO:0009496 plastoquinol--plastocyanin reductase activity IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0010109 regulation of photosynthesis IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
MF GO:0010242 oxygen evolving activity IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
BP GO:0042548 regulation of photosynthesis, light reaction IEP Neighborhood
BP GO:0042549 photosystem II stabilization IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0052880 oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
MF GO:0098809 nitrite reductase activity IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR009806 PSII_PsbW_class2 1 135
No external refs found!