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  5. GSVIVT01000771001

GSVIVT01000771001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000688 (Archaeplastida) Phylogenetic Tree(s): OG0000688_tree ,
OG_05_0000488 (LandPlants) Phylogenetic Tree(s): OG_05_0000488_tree ,
OG_06_0019953 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000771001
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
AT4G17880 No alias Basic helix-loop-helix (bHLH) DNA-binding family protein 0.03 Archaeplastida
Gb_10001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_28786 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc06g083980.3.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Solyc08g076930.1.1 No alias transcription factor (bHLH) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 309 355
IPR025610 MYC/MYB_N 50 220
No external refs found!