GSVIVT01000832001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type


Gene families : OG0001367 (Archaeplastida) Phylogenetic Tree(s): OG0001367_tree ,
OG_05_0001852 (LandPlants) Phylogenetic Tree(s): OG_05_0001852_tree ,
OG_06_0008737 (SeedPlants) Phylogenetic Tree(s): OG_06_0008737_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000832001
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00268880 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00053p00044540 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_11374 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida
Gb_22696 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
LOC_Os01g72000.1 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida
MA_82334g0010 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Mp1g23740.1 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Mp1g26780.1 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
Pp3c12_4020V3.1 No alias Armadillo/beta-catenin-like repeat family protein 0.02 Archaeplastida
Pp3c13_14550V3.1 No alias ARM repeat superfamily protein 0.02 Archaeplastida
Smo77081 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Solyc01g068490.4.1 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida
Solyc01g096200.4.1 No alias E3 ubiquitin ligase (PUB) 0.05 Archaeplastida
Solyc03g082690.3.1 No alias E3 ubiquitin ligase (PUB) 0.05 Archaeplastida
Solyc09g083060.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e018652_P001 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1901642 nucleoside transmembrane transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!