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  5. GSVIVT01000843001

GSVIVT01000843001


Description : Protein trichome birefringence-like 38 OS=Arabidopsis thaliana


Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0000413 (LandPlants) Phylogenetic Tree(s): OG_05_0000413_tree ,
OG_06_0000213 (SeedPlants) Phylogenetic Tree(s): OG_06_0000213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000843001
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00135110 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00007p00137180 evm_27.TU.AmTr_v1... Protein PMR5 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00023p00032550 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 35 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00023p00040670 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 33 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00114p00046060 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 36 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT2G31110 TBL40 Plant protein of unknown function (DUF828) 0.03 Archaeplastida
AT2G34070 TBL37 TRICHOME BIREFRINGENCE-LIKE 37 0.04 Archaeplastida
AT2G42570 TBL39 TRICHOME BIREFRINGENCE-LIKE 39 0.03 Archaeplastida
GSVIVT01011180001 No alias Protein trichome birefringence-like 3 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01014106001 No alias Protein trichome birefringence-like 38 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01020723001 No alias Protein trichome birefringence-like 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01028123001 No alias Protein trichome birefringence-like 6 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01032748001 No alias Protein trichome birefringence-like 33 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01032800001 No alias Cell wall.hemicellulose.xylan.modification and... 0.04 Archaeplastida
Gb_36284 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
LOC_Os01g30970.1 No alias Protein trichome birefringence-like 8 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os01g46350.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g18110.1 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os03g18120.1 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
LOC_Os03g60340.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
LOC_Os05g28830.1 No alias xylan O-acetyltransferase (XOAT) 0.05 Archaeplastida
LOC_Os05g35190.1 No alias Protein trichome berefringence-like 7 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os05g39350.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
LOC_Os05g51020.2 No alias Protein trichome birefringence-like 1 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os06g34060.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os07g46230.1 No alias Protein trichome birefringence-like 11 OS=Arabidopsis... 0.02 Archaeplastida
MA_20334g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_290779g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_441100g0010 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_46461g0010 No alias Protein trichome birefringence OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_5701g0010 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
MA_81834g0010 No alias Protein trichome birefringence-like 45 OS=Arabidopsis... 0.05 Archaeplastida
MA_9645753g0010 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c6_110V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 11 0.04 Archaeplastida
Solyc01g068430.3.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.05 Archaeplastida
Solyc03g095810.3.1 No alias xylan O-acetyltransferase (XOAT) 0.05 Archaeplastida
Solyc05g052440.2.1 No alias xylan O-acetyltransferase (XOAT) 0.06 Archaeplastida
Solyc06g084290.3.1 No alias rhamnogalacturonan-I O-acetyltransferase (TBL) 0.03 Archaeplastida
Solyc07g053330.2.1 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
Solyc07g053350.4.1 No alias Protein trichome birefringence-like 39 OS=Arabidopsis... 0.03 Archaeplastida
Solyc07g062210.4.1 No alias Protein trichome birefringence-like 37 OS=Arabidopsis... 0.03 Archaeplastida
Solyc09g005630.3.1 No alias xylan O-acetyltransferase (XOAT) 0.05 Archaeplastida
Solyc10g007450.2.1 No alias Protein trichome birefringence-like 42 OS=Arabidopsis... 0.03 Archaeplastida
Solyc10g008030.4.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.04 Archaeplastida
Solyc10g076570.2.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Solyc10g080550.2.1 No alias Protein trichome birefringence OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g014200.3.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Solyc12g044450.2.1 No alias Protein trichome birefringence-like 42 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e001317_P001 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Zm00001e026898_P004 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Zm00001e027860_P001 No alias Protein trichome birefringence OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e038413_P001 No alias xylan O-acetyltransferase (XOAT) 0.05 Archaeplastida
Zm00001e041204_P001 No alias Protein trichome birefringence-like 2 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 37 89
IPR026057 PC-Esterase 90 355
No external refs found!