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  5. GSVIVT01000943001

GSVIVT01000943001


Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-6 component


Gene families : OG0004085 (Archaeplastida) Phylogenetic Tree(s): OG0004085_tree ,
OG_05_0111558 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0089576 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000943001
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001339.5 No alias Protein degradation.26S proteasome.20S core... 0.01 Archaeplastida
Cre26.g756797 No alias Protein degradation.26S proteasome.20S core... 0.01 Archaeplastida
Pp3c16_16960V3.1 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.03 Archaeplastida
Pp3c27_2640V3.1 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.02 Archaeplastida
Solyc02g084920.3.1 No alias component beta type-6 of 26S proteasome 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 101 212
No external refs found!