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  5. GSVIVT01001005001

GSVIVT01001005001


Description : Protein trichome birefringence-like 36 OS=Arabidopsis thaliana


Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0000413 (LandPlants) Phylogenetic Tree(s): OG_05_0000413_tree ,
OG_06_0000213 (SeedPlants) Phylogenetic Tree(s): OG_06_0000213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001005001
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00131340 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xylan.modification and... 0.04 Archaeplastida
AMTR_s00007p00135110 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 3 OS=Arabidopsis thaliana 0.08 Archaeplastida
AMTR_s00007p00137180 evm_27.TU.AmTr_v1... Protein PMR5 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00012p00251740 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 36 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00021p00123440 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 31 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00023p00040670 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 33 OS=Arabidopsis thaliana 0.07 Archaeplastida
AMTR_s00114p00046060 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 36 OS=Arabidopsis thaliana 0.11 Archaeplastida
AT1G29050 TBL38 TRICHOME BIREFRINGENCE-LIKE 38 0.04 Archaeplastida
AT1G73140 TBL31 Plant protein of unknown function (DUF828) 0.1 Archaeplastida
AT2G31110 TBL40 Plant protein of unknown function (DUF828) 0.06 Archaeplastida
AT2G38320 TBL34 TRICHOME BIREFRINGENCE-LIKE 34 0.04 Archaeplastida
AT2G40160 TBL30 Plant protein of unknown function (DUF828) 0.03 Archaeplastida
AT2G40320 TBL33 TRICHOME BIREFRINGENCE-LIKE 33 0.08 Archaeplastida
AT3G06080 TBL10 Plant protein of unknown function (DUF828) 0.02 Archaeplastida
AT3G55990 ESK1, TBL29 Plant protein of unknown function (DUF828) 0.06 Archaeplastida
AT5G01360 TBL3 Plant protein of unknown function (DUF828) 0.07 Archaeplastida
AT5G06230 TBL9 TRICHOME BIREFRINGENCE-LIKE 9 0.03 Archaeplastida
GSVIVT01017904001 No alias Protein trichome birefringence-like 10 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01020678001 No alias Protein trichome birefringence-like 39 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01020682001 No alias Protein trichome birefringence-like 3 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01020723001 No alias Protein trichome birefringence-like 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01028123001 No alias Protein trichome birefringence-like 6 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01033900001 No alias Protein trichome birefringence-like 8 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01035039001 No alias Protein trichome birefringence-like 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_06481 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Gb_10738 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Gb_34157 No alias xylan O-acetyltransferase (XOAT) 0.05 Archaeplastida
Gb_36284 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
Gb_38118 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
LOC_Os01g46350.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.09 Archaeplastida
LOC_Os01g61460.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
LOC_Os03g18110.1 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g18120.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
LOC_Os03g18140.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
LOC_Os03g60300.1 No alias xylan O-acetyltransferase (XOAT) 0.06 Archaeplastida
LOC_Os03g60340.1 No alias xylan O-acetyltransferase (XOAT) 0.07 Archaeplastida
LOC_Os04g42900.1 No alias Protein trichome birefringence-like 2 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os05g28830.1 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
LOC_Os05g39350.1 No alias xylan O-acetyltransferase (XOAT) 0.06 Archaeplastida
LOC_Os05g51020.2 No alias Protein trichome birefringence-like 1 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os06g10560.1 No alias Protein trichome birefringence-like 1 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os06g34060.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os07g49280.1 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
MA_10121307g0010 No alias Protein trichome birefringence-like 28 OS=Arabidopsis... 0.01 Archaeplastida
MA_10143614g0010 No alias Protein trichome birefringence-like 11 OS=Arabidopsis... 0.03 Archaeplastida
MA_102045g0010 No alias Protein trichome birefringence-like 1 OS=Arabidopsis... 0.02 Archaeplastida
MA_10436441g0020 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
MA_10436708g0010 No alias Protein trichome birefringence-like 6 OS=Arabidopsis... 0.03 Archaeplastida
MA_119111g0010 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
MA_2962g0010 No alias Protein trichome birefringence-like 6 OS=Arabidopsis... 0.02 Archaeplastida
MA_31151g0010 No alias xylan O-acetyltransferase (XOAT) 0.05 Archaeplastida
MA_366027g0010 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
MA_441100g0010 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_459495g0010 No alias Protein trichome birefringence-like 2 OS=Arabidopsis... 0.04 Archaeplastida
MA_46461g0010 No alias Protein trichome birefringence OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_467548g0010 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_53397g0010 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_5701g0010 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
MA_793810g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9645753g0010 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp2g11180.1 No alias rhamnogalacturonan-I O-acetyltransferase (TBL) 0.02 Archaeplastida
Mp2g21170.1 No alias Protein trichome birefringence-like 5 OS=Arabidopsis... 0.02 Archaeplastida
Pp3c5_27320V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 11 0.02 Archaeplastida
Pp3c6_110V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 11 0.04 Archaeplastida
Pp3c7_1960V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 11 0.02 Archaeplastida
Solyc01g060270.1.1 No alias Protein trichome birefringence-like 4 OS=Arabidopsis... 0.03 Archaeplastida
Solyc01g068430.3.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.03 Archaeplastida
Solyc02g082940.3.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Solyc02g082950.3.1 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
Solyc03g095810.3.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Solyc03g096030.3.1 No alias xylan O-acetyltransferase (XOAT) 0.05 Archaeplastida
Solyc04g064740.4.1 No alias Protein trichome berefringence-like 7 OS=Arabidopsis... 0.03 Archaeplastida
Solyc05g052450.3.1 No alias xylan O-acetyltransferase (XOAT) 0.05 Archaeplastida
Solyc06g007170.4.1 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc06g050920.4.1 No alias xylan O-acetyltransferase (XOAT) 0.09 Archaeplastida
Solyc06g051350.4.1 No alias xylan O-acetyltransferase (XOAT) 0.06 Archaeplastida
Solyc07g053330.2.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Solyc07g062210.4.1 No alias Protein trichome birefringence-like 37 OS=Arabidopsis... 0.08 Archaeplastida
Solyc09g005630.3.1 No alias xylan O-acetyltransferase (XOAT) 0.09 Archaeplastida
Solyc09g015350.4.1 No alias xylan O-acetyltransferase (XOAT) 0.05 Archaeplastida
Solyc10g076570.2.1 No alias xylan O-acetyltransferase (XOAT) 0.07 Archaeplastida
Solyc11g006990.2.1 No alias Protein trichome birefringence-like 36 OS=Arabidopsis... 0.02 Archaeplastida
Solyc12g014200.3.1 No alias xylan O-acetyltransferase (XOAT) 0.09 Archaeplastida
Zm00001e001317_P001 No alias xylan O-acetyltransferase (XOAT) 0.08 Archaeplastida
Zm00001e006159_P001 No alias xylan O-acetyltransferase (XOAT) 0.07 Archaeplastida
Zm00001e011775_P001 No alias xylan O-acetyltransferase (XOAT) 0.05 Archaeplastida
Zm00001e016007_P001 No alias Protein trichome birefringence OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e017519_P001 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e019393_P001 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Zm00001e020302_P001 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e023779_P001 No alias Protein trichome birefringence OS=Arabidopsis thaliana... 0.01 Archaeplastida
Zm00001e023925_P001 No alias Protein ESKIMO 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e030411_P001 No alias Protein trichome birefringence-like 5 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e030698_P002 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e031480_P001 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
Zm00001e038413_P001 No alias xylan O-acetyltransferase (XOAT) 0.05 Archaeplastida
Zm00001e038414_P003 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR026057 PC-Esterase 114 384
IPR025846 PMR5_N_dom 62 112
No external refs found!