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  5. GSVIVT01001148001

GSVIVT01001148001


Description : Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor


Gene families : OG0002064 (Archaeplastida) Phylogenetic Tree(s): OG0002064_tree ,
OG_05_0006912 (LandPlants) Phylogenetic Tree(s): OG_05_0006912_tree ,
OG_06_0007568 (SeedPlants) Phylogenetic Tree(s): OG_06_0007568_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001148001
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
AT3G63190 AtcpRRF, HFP108,... ribosome recycling factor, chloroplast precursor 0.07 Archaeplastida
Cre03.g156050 No alias Protein biosynthesis.organelle translation... 0.05 Archaeplastida
Gb_31542 No alias RRF translation ribosome recycling factor 0.03 Archaeplastida
LOC_Os07g38300.1 No alias RRF translation ribosome recycling factor 0.08 Archaeplastida
MA_452248g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g01830.1 No alias RRF translation ribosome recycling factor 0.02 Archaeplastida
Mp5g14000.1 No alias RRF translation ribosome recycling factor 0.09 Archaeplastida
Pp3c18_6870V3.1 No alias ribosome recycling factor, chloroplast precursor 0.02 Archaeplastida
Solyc09g065270.3.1 No alias RRF translation ribosome recycling factor 0.1 Archaeplastida
Zm00001e021862_P002 No alias RRF translation ribosome recycling factor 0.04 Archaeplastida
Zm00001e029168_P003 No alias RRF translation ribosome recycling factor 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
BP GO:0001932 regulation of protein phosphorylation IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005779 integral component of peroxisomal membrane IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009512 cytochrome b6f complex IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016559 peroxisome fission IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0019900 kinase binding IEP Neighborhood
MF GO:0019901 protein kinase binding IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0042325 regulation of phosphorylation IEP Neighborhood
BP GO:0043549 regulation of kinase activity IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045859 regulation of protein kinase activity IEP Neighborhood
MF GO:0046422 violaxanthin de-epoxidase activity IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051338 regulation of transferase activity IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR023584 Ribosome_recyc_fac_dom 111 272
No external refs found!