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  5. GSVIVT01001177001

GSVIVT01001177001


Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycoproteins.xylogen-type arabinogalactan protein


Gene families : OG0000162 (Archaeplastida) Phylogenetic Tree(s): OG0000162_tree ,
OG_05_0000065 (LandPlants) Phylogenetic Tree(s): OG_05_0000065_tree ,
OG_06_0000223 (SeedPlants) Phylogenetic Tree(s): OG_06_0000223_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001177001
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AT1G55260 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
GSVIVT01001178001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
GSVIVT01001181001 No alias No description available 0.04 Archaeplastida
GSVIVT01018010001 No alias No description available 0.05 Archaeplastida
Gb_01917 No alias classical arabinogalactan protein 0.02 Archaeplastida
Gb_02441 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Gb_02455 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Gb_06123 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_08579 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
MA_133359g0030 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Pp3c2_6280V3.1 No alias glycosylphosphatidylinositol-anchored lipid protein transfer 1 0.02 Archaeplastida
Solyc03g005200.3.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e011462_P001 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 16 105
No external refs found!