GSVIVT01001182001


Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-4 component


Gene families : OG0003655 (Archaeplastida) Phylogenetic Tree(s): OG0003655_tree ,
OG_05_0004102 (LandPlants) Phylogenetic Tree(s): OG_05_0004102_tree ,
OG_06_0004916 (SeedPlants) Phylogenetic Tree(s): OG_06_0004916_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001182001
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AT4G14800 PBD2 20S proteasome beta subunit D2 0.06 Archaeplastida
Cpa|evm.model.tig00020554.80 No alias Protein degradation.26S proteasome.20S core... 0.02 Archaeplastida
Cre14.g610950 No alias Protein degradation.26S proteasome.20S core... 0.05 Archaeplastida
MA_119122g0010 No alias Proteasome subunit beta type-2-B OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp4g04320.1 No alias component beta type-4 of 26S proteasome 0.06 Archaeplastida
Solyc09g082320.3.1 No alias component beta type-4 of 26S proteasome 0.07 Archaeplastida
Zm00001e012245_P001 No alias component beta type-4 of 26S proteasome 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 3 147
No external refs found!