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  5. GSVIVT01001418001

GSVIVT01001418001


Description : Phytohormones.auxin.synthesis.indole-3-pyruvic acid (IPyA) pathway.tryptophan aminotransferase


Gene families : OG0000478 (Archaeplastida) Phylogenetic Tree(s): OG0000478_tree ,
OG_05_0000551 (LandPlants) Phylogenetic Tree(s): OG_05_0000551_tree ,
OG_06_0001923 (SeedPlants) Phylogenetic Tree(s): OG_06_0001923_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001418001
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Smo406798 No alias Phytohormones.auxin.synthesis.indole-3-pyruvic acid... 0.02 Archaeplastida
Solyc02g062190.2.1 No alias Tryptophan aminotransferase-related protein 4... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016846 carbon-sulfur lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006948 Alliinase_C 93 449
IPR006947 EGF_alliinase 37 91
No external refs found!