AMTR_s00034p00045070 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00034.6

Description : Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.fatty acid elongation.fatty acid elongation complex.KCS 3-ketoacyl-CoA synthase


Gene families : OG0000123 (Archaeplastida) Phylogenetic Tree(s): OG0000123_tree ,
OG_05_0004454 (LandPlants) Phylogenetic Tree(s): OG_05_0004454_tree ,
OG_06_0002864 (SeedPlants) Phylogenetic Tree(s): OG_06_0002864_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00034p00045070
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00245180 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 Archaeplastida
AMTR_s00069p00182480 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.fatty acid... 0.04 Archaeplastida
AMTR_s00078p00154520 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.fatty acid... 0.04 Archaeplastida
AMTR_s00129p00101620 evm_27.TU.AmTr_v1... 3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00178p00018030 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.fatty acid... 0.06 Archaeplastida
AT1G01120 KCS1 3-ketoacyl-CoA synthase 1 0.05 Archaeplastida
AT1G07720 KCS3 3-ketoacyl-CoA synthase 3 0.04 Archaeplastida
AT1G68530 G2, POP1, KCS6,... 3-ketoacyl-CoA synthase 6 0.07 Archaeplastida
AT1G71160 KCS7 3-ketoacyl-CoA synthase 7 0.05 Archaeplastida
AT2G26250 KCS10, FDH 3-ketoacyl-CoA synthase 10 0.04 Archaeplastida
AT3G52160 KCS15 3-ketoacyl-CoA synthase 15 0.05 Archaeplastida
AT5G43760 KCS20 3-ketoacyl-CoA synthase 20 0.09 Archaeplastida
AT5G49070 KCS21 3-ketoacyl-CoA synthase 21 0.05 Archaeplastida
GSVIVT01005975001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.05 Archaeplastida
GSVIVT01018539001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.04 Archaeplastida
GSVIVT01022919001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.05 Archaeplastida
GSVIVT01025052001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.04 Archaeplastida
GSVIVT01026270001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.05 Archaeplastida
GSVIVT01034244001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.04 Archaeplastida
Gb_05331 No alias 3-ketoacyl-CoA synthase (KCS) 0.1 Archaeplastida
Gb_06885 No alias 3-ketoacyl-CoA synthase (KCS) 0.06 Archaeplastida
Gb_08308 No alias 3-ketoacyl-CoA synthase (KCS) 0.05 Archaeplastida
Gb_15649 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
Gb_15941 No alias 3-ketoacyl-CoA synthase (KCS) 0.06 Archaeplastida
Gb_17018 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
Gb_27864 No alias 3-ketoacyl-CoA synthase (KCS) 0.09 Archaeplastida
Gb_32625 No alias 3-ketoacyl-CoA synthase (KCS) 0.08 Archaeplastida
LOC_Os02g49920.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.06 Archaeplastida
LOC_Os03g08360.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.05 Archaeplastida
LOC_Os03g26530.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.06 Archaeplastida
LOC_Os06g14810.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.07 Archaeplastida
LOC_Os09g19650.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
LOC_Os09g34930.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
LOC_Os10g33370.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
MA_10426663g0020 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
MA_10429708g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
MA_10433600g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
MA_10605g0020 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
MA_11217g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.06 Archaeplastida
MA_339700g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.05 Archaeplastida
MA_415118g0020 No alias 3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_43136g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
MA_759169g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
Mp2g20220.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
Pp3c1_26250V3.1 No alias 3-ketoacyl-CoA synthase 11 0.05 Archaeplastida
Pp3c2_16180V3.1 No alias 3-ketoacyl-CoA synthase 11 0.02 Archaeplastida
Pp3c8_1690V3.1 No alias 3-ketoacyl-CoA synthase 11 0.05 Archaeplastida
Pp3c8_6790V3.1 No alias 3-ketoacyl-CoA synthase 4 0.03 Archaeplastida
Smo231244 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.05 Archaeplastida
Smo437285 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 Archaeplastida
Smo79947 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.06 Archaeplastida
Smo91671 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 Archaeplastida
Solyc02g063140.4.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
Solyc02g085870.3.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.06 Archaeplastida
Solyc05g009270.4.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.05 Archaeplastida
Solyc05g009280.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc05g013220.2.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
Solyc08g067260.4.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.06 Archaeplastida
Solyc09g083050.3.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.05 Archaeplastida
Solyc10g009240.3.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Solyc11g072990.1.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.07 Archaeplastida
Solyc12g056720.2.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Zm00001e000476_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Zm00001e000593_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.07 Archaeplastida
Zm00001e000868_P002 No alias 3-ketoacyl-CoA synthase (KCS) 0.06 Archaeplastida
Zm00001e001021_P002 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e001847_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
Zm00001e002667_P002 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
Zm00001e004603_P002 No alias 3-ketoacyl-CoA synthase (KCS) 0.07 Archaeplastida
Zm00001e004773_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.06 Archaeplastida
Zm00001e012803_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.07 Archaeplastida
Zm00001e016197_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
Zm00001e021255_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.06 Archaeplastida
Zm00001e023474_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.06 Archaeplastida
Zm00001e033922_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Zm00001e034732_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.07 Archaeplastida
Zm00001e038586_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
BP GO:0008610 lipid biosynthetic process IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013601 FAE1_typ3_polyketide_synth 35 320
IPR013747 ACP_syn_III_C 335 417
No external refs found!