GSVIVT01001564001

Description : Probable disease resistance protein At1g12290 OS=Arabidopsis thaliana

Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01001564001
Cluster	HCCA: Cluster_216

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00050p00214060	evm_27.TU.AmTr_v1...	No description available	0.05	Archaeplastida
AMTR_s00243p00014580	evm_27.TU.AmTr_v1...	No description available	0.04	Archaeplastida
GSVIVT01017020001	No alias	Probable disease resistance protein At5g63020...	0.04	Archaeplastida
GSVIVT01017023001	No alias	Disease resistance protein SUMM2 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01017143001	No alias	Disease resistance protein SUMM2 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01017148001	No alias	Disease resistance protein SUMM2 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01017225001	No alias	Probable disease resistance protein At1g12290...	0.04	Archaeplastida
GSVIVT01017227001	No alias	No description available	0.03	Archaeplastida
GSVIVT01017229001	No alias	Disease resistance protein SUMM2 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01034252001	No alias	Probable disease resistance protein At1g61300...	0.04	Archaeplastida
GSVIVT01038446001	No alias	Probable disease resistance protein At1g52660...	0.04	Archaeplastida
Gb_37091	No alias	Probable disease resistance protein At1g15890...	0.03	Archaeplastida
LOC_Os09g14100.1	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os11g29090.1	No alias	Disease resistance protein At4g27190 OS=Arabidopsis...	0.04	Archaeplastida
MA_10062820g0010	No alias	Probable disease resistance protein At1g61300...	0.05	Archaeplastida
MA_9388679g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	237	297
IPR002182	NB-ARC	4	100

External Links

No external refs found!