GSVIVT01001603001


Description : Laccase-14 OS=Arabidopsis thaliana


Gene families : OG0000114 (Archaeplastida) Phylogenetic Tree(s): OG0000114_tree ,
OG_05_0000045 (LandPlants) Phylogenetic Tree(s): OG_05_0000045_tree ,
OG_06_0000147 (SeedPlants) Phylogenetic Tree(s): OG_06_0000147_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001603001
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00235480 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.05 Archaeplastida
AMTR_s00012p00061860 evm_27.TU.AmTr_v1... Cell wall.lignin.monolignol conjugation and... 0.04 Archaeplastida
AMTR_s00012p00061910 evm_27.TU.AmTr_v1... Cell wall.lignin.monolignol conjugation and... 0.05 Archaeplastida
AMTR_s00045p00045490 evm_27.TU.AmTr_v1... Cell wall.lignin.monolignol conjugation and... 0.07 Archaeplastida
AMTR_s00055p00189700 evm_27.TU.AmTr_v1... Cell wall.lignin.monolignol conjugation and... 0.05 Archaeplastida
AMTR_s00055p00190270 evm_27.TU.AmTr_v1... Cell wall.lignin.monolignol conjugation and... 0.04 Archaeplastida
AMTR_s00069p00085210 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.05 Archaeplastida
AT2G29130 ATLAC2, LAC2 laccase 2 0.03 Archaeplastida
AT2G30210 LAC3 laccase 3 0.04 Archaeplastida
AT2G38080 LAC4, IRX12,... Laccase/Diphenol oxidase family protein 0.03 Archaeplastida
AT5G01190 LAC10 laccase 10 0.04 Archaeplastida
AT5G05390 LAC12 laccase 12 0.03 Archaeplastida
AT5G07130 LAC13 laccase 13 0.05 Archaeplastida
AT5G09360 LAC14 laccase 14 0.04 Archaeplastida
AT5G48100 TT10, LAC15, ATLAC15 Laccase/Diphenol oxidase family protein 0.02 Archaeplastida
AT5G60020 ATLAC17, LAC17 laccase 17 0.03 Archaeplastida
GSVIVT01016372001 No alias Cell wall.lignin.monolignol conjugation and... 0.07 Archaeplastida
GSVIVT01016490001 No alias Cell wall.lignin.monolignol conjugation and... 0.04 Archaeplastida
GSVIVT01016513001 No alias Cell wall.lignin.monolignol conjugation and... 0.04 Archaeplastida
GSVIVT01024795001 No alias Cell wall.lignin.monolignol conjugation and... 0.03 Archaeplastida
GSVIVT01025046001 No alias Cell wall.lignin.monolignol conjugation and... 0.03 Archaeplastida
GSVIVT01032744001 No alias Laccase-12 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01034003001 No alias Cell wall.lignin.monolignol conjugation and... 0.02 Archaeplastida
GSVIVT01034137001 No alias Cell wall.lignin.monolignol conjugation and... 0.03 Archaeplastida
GSVIVT01034138001 No alias Cell wall.lignin.monolignol conjugation and... 0.04 Archaeplastida
GSVIVT01034139001 No alias Cell wall.lignin.monolignol conjugation and... 0.04 Archaeplastida
GSVIVT01034146001 No alias Cell wall.lignin.monolignol conjugation and... 0.04 Archaeplastida
Gb_00462 No alias lignin laccase 0.02 Archaeplastida
LOC_Os01g62480.1 No alias lignin laccase 0.03 Archaeplastida
LOC_Os03g16610.1 No alias lignin laccase 0.02 Archaeplastida
LOC_Os03g18640.1 No alias Laccase-5 OS=Arabidopsis thaliana (sp|q9siy8|lac5_arath... 0.05 Archaeplastida
LOC_Os05g38390.1 No alias Putative laccase-11 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os05g38420.1 No alias lignin laccase 0.05 Archaeplastida
LOC_Os11g01730.1 No alias Putative laccase-17 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os11g48060.1 No alias lignin laccase 0.06 Archaeplastida
LOC_Os12g15920.1 No alias Laccase-25 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_10430789g0010 No alias Putative laccase-5 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_10432715g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10434084g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10434090g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10434864g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.07 Archaeplastida
MA_10436564g0010 No alias Putative laccase-17 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_122769g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_14240g0010 No alias Laccase-4 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_192464g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_19643g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_213397g0020 No alias Laccase-12 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_57140g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_7035458g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_812936g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_8866650g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp3g20310.1 No alias Laccase-2 OS=Oryza sativa subsp. japonica... 0.07 Archaeplastida
Pp3c18_3460V3.1 No alias laccase 12 0.03 Archaeplastida
Pp3c6_3290V3.1 No alias laccase 2 0.03 Archaeplastida
Smo404333 No alias Laccase-4 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
Solyc02g062650.3.1 No alias Laccase-11 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g085110.4.1 No alias Laccase-11 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc05g043360.3.1 No alias Laccase-7 OS=Arabidopsis thaliana (sp|q9sr40|lac7_arath... 0.04 Archaeplastida
Solyc05g050540.4.1 No alias Laccase-6 OS=Arabidopsis thaliana (sp|q9zpy2|lac6_arath... 0.03 Archaeplastida
Solyc05g052340.4.1 No alias Laccase-5 OS=Arabidopsis thaliana (sp|q9siy8|lac5_arath... 0.04 Archaeplastida
Solyc05g052400.3.1 No alias Laccase-12 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc06g076330.3.1 No alias lignin laccase 0.05 Archaeplastida
Solyc07g049460.3.1 No alias Laccase-7 OS=Arabidopsis thaliana (sp|q9sr40|lac7_arath... 0.08 Archaeplastida
Solyc09g010990.3.1 No alias lignin laccase 0.04 Archaeplastida
Solyc09g010995.1.1 No alias lignin laccase 0.07 Archaeplastida
Solyc09g011970.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc09g014240.4.1 No alias lignin laccase 0.05 Archaeplastida
Solyc10g076830.2.1 No alias lignin laccase 0.05 Archaeplastida
Solyc10g085090.3.1 No alias No annotation 0.03 Archaeplastida
Zm00001e001209_P001 No alias lignin laccase 0.03 Archaeplastida
Zm00001e001354_P001 No alias Laccase-3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e019303_P001 No alias lignin laccase 0.04 Archaeplastida
Zm00001e019316_P001 No alias lignin laccase 0.05 Archaeplastida
Zm00001e021354_P001 No alias Laccase-25 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e023953_P001 No alias Laccase-23 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e028767_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e031826_P001 No alias lignin laccase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001117 Cu-oxidase 165 312
IPR011706 Cu-oxidase_2 419 551
IPR011707 Cu-oxidase_3 39 151
No external refs found!