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  5. GSVIVT01001827001

GSVIVT01001827001


Description : 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana


Gene families : OG0000179 (Archaeplastida) Phylogenetic Tree(s): OG0000179_tree ,
OG_05_0000459 (LandPlants) Phylogenetic Tree(s): OG_05_0000459_tree ,
OG_06_0000725 (SeedPlants) Phylogenetic Tree(s): OG_06_0000725_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001827001
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00238960 evm_27.TU.AmTr_v1... Phytohormones.jasmonic acid.synthesis.OPC-8:CoA synthetase 0.03 Archaeplastida
AMTR_s00001p00239750 evm_27.TU.AmTr_v1... Phytohormones.jasmonic acid.synthesis.OPC-8:CoA synthetase 0.03 Archaeplastida
AMTR_s00048p00101790 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
GSVIVT01011541001 No alias 4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01024400001 No alias 4-coumarate--CoA ligase 2 OS=Glycine max 0.04 Archaeplastida
Gb_19735 No alias 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g67540.1 No alias 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os02g08100.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
LOC_Os03g04000.1 No alias OPC-8:CoA synthetase 0.02 Archaeplastida
MA_10432138g0010 No alias 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_109119g0010 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 Archaeplastida
Mp5g01200.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 Archaeplastida
Pp3c19_13170V3.1 No alias 4-coumarate:CoA ligase 3 0.02 Archaeplastida
Pp3c8_730V3.1 No alias acyl-CoA synthetase 5 0.03 Archaeplastida
Zm00001e000264_P001 No alias OPC-8:CoA synthetase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence thiol-dependent ubiquitinyl hydrolase activitySource
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 53 220
IPR000873 AMP-dep_Synth/Lig 221 411
IPR025110 AMP-bd_C 420 495
No external refs found!