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  5. GSVIVT01001859001

GSVIVT01001859001


No description available


Gene families : OG0003461 (Archaeplastida) Phylogenetic Tree(s): OG0003461_tree ,
OG_05_0004061 (LandPlants) Phylogenetic Tree(s): OG_05_0004061_tree ,
OG_06_0005030 (SeedPlants) Phylogenetic Tree(s): OG_06_0005030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001859001
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G04140 No alias Transducin family protein / WD-40 repeat family protein 0.09 Archaeplastida
GSVIVT01028455001 No alias No description available 0.04 Archaeplastida
Gb_28988 No alias no hits & (original description: none) 0.03 Archaeplastida
Smo413471 No alias No description available 0.04 Archaeplastida
Zm00001e040649_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 143 182
IPR001680 WD40_repeat 116 139
No external refs found!