GSVIVT01001863001

Description : Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.beta amylase

Gene families : OG0000278 (Archaeplastida) Phylogenetic Tree(s): OG0000278_tree ,
OG_05_0000691 (LandPlants) Phylogenetic Tree(s): OG_05_0000691_tree ,
OG_06_0000632 (SeedPlants) Phylogenetic Tree(s): OG_06_0000632_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01001863001
Cluster	HCCA: Cluster_20

Target	Alias	Description	ECC score	Gene Family Method
AT5G18670	BAM9, BMY3	beta-amylase 3	0.04	Archaeplastida
Cre06.g270350	No alias	Carbohydrate metabolism.starch...	0.02	Archaeplastida
Cre06.g307150	No alias	Carbohydrate metabolism.starch...	0.02	Archaeplastida
Gb_14166	No alias	beta amylase	0.03	Archaeplastida
Zm00001e035797_P003	No alias	beta amylase	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016161	beta-amylase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0008104	protein localization	IEP	Neighborhood
BP	GO:0015031	protein transport	IEP	Neighborhood
BP	GO:0015833	peptide transport	IEP	Neighborhood
CC	GO:0032993	protein-DNA complex	IEP	Neighborhood
BP	GO:0033036	macromolecule localization	IEP	Neighborhood
BP	GO:0042886	amide transport	IEP	Neighborhood
CC	GO:0044815	DNA packaging complex	IEP	Neighborhood
BP	GO:0045184	establishment of protein localization	IEP	Neighborhood
BP	GO:0071702	organic substance transport	IEP	Neighborhood
BP	GO:0071705	nitrogen compound transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001554	Glyco_hydro_14	184	468

External Links

No external refs found!