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No description available
Gene families : OG0000242 (Archaeplastida) Phylogenetic Tree(s): OG0000242_tree ,
OG_05_0003382 (LandPlants) Phylogenetic Tree(s): OG_05_0003382_tree ,
OG_06_0003848 (SeedPlants) Phylogenetic Tree(s): OG_06_0003848_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01001911001 | |
| Cluster | HCCA: Cluster_220 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G14400 | UBP25 | ubiquitin-specific protease 25 | 0.04 | Archaeplastida | |
| AT4G24560 | UBP16 | ubiquitin-specific protease 16 | 0.03 | Archaeplastida | |
| Cpa|evm.model.tig00020918.7 | No alias | Protein degradation.peptidase families.cysteine-type... | 0.02 | Archaeplastida | |
| Cre14.g629300 | No alias | Protein degradation.peptidase families.cysteine-type... | 0.04 | Archaeplastida | |
| Gb_38396 | No alias | deubiquitinase (UBP15-21) | 0.02 | Archaeplastida | |
| LOC_Os05g43480.1 | No alias | deubiquitinase (UBP25) | 0.03 | Archaeplastida | |
| MA_10429414g0020 | No alias | deubiquitinase (UBP15-21) | 0.06 | Archaeplastida | |
| MA_10431488g0010 | No alias | deubiquitinase (UBP23) | 0.02 | Archaeplastida | |
| MA_132593g0020 | No alias | Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis... | 0.04 | Archaeplastida | |
| MA_53569g0010 | No alias | deubiquitinase (UBP23) | 0.04 | Archaeplastida | |
| Mp1g03220.1 | No alias | Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis... | 0.02 | Archaeplastida | |
| Mp3g16110.1 | No alias | deubiquitinase (UBP23) | 0.05 | Archaeplastida | |
| Pp3c5_25690V3.1 | No alias | ubiquitin-specific protease 18 | 0.03 | Archaeplastida | |
| Pp3c6_5860V3.1 | No alias | ubiquitin-specific protease 18 | 0.02 | Archaeplastida | |
| Solyc08g069050.3.1 | No alias | deubiquitinase (UBP15-21) | 0.04 | Archaeplastida | |
| Zm00001e024878_P003 | No alias | deubiquitinase (UBP15-21) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002097 | tRNA wobble base modification | IEP | Neighborhood |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| MF | GO:0003917 | DNA topoisomerase type I activity | IEP | Neighborhood |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0004826 | phenylalanine-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| CC | GO:0005694 | chromosome | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood |
| BP | GO:0006400 | tRNA modification | IEP | Neighborhood |
| BP | GO:0006508 | proteolysis | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006886 | intracellular protein transport | IEP | Neighborhood |
| BP | GO:0008104 | protein localization | IEP | Neighborhood |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Neighborhood |
| MF | GO:0008536 | Ran GTPase binding | IEP | Neighborhood |
| BP | GO:0015031 | protein transport | IEP | Neighborhood |
| BP | GO:0015833 | peptide transport | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016579 | protein deubiquitination | IEP | Neighborhood |
| MF | GO:0016853 | isomerase activity | IEP | Neighborhood |
| MF | GO:0016874 | ligase activity | IEP | Neighborhood |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
| MF | GO:0017016 | Ras GTPase binding | IEP | Neighborhood |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Neighborhood |
| MF | GO:0019899 | enzyme binding | IEP | Neighborhood |
| MF | GO:0031267 | small GTPase binding | IEP | Neighborhood |
| BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
| CC | GO:0033588 | Elongator holoenzyme complex | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
| MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Neighborhood |
| BP | GO:0042886 | amide transport | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0045184 | establishment of protein localization | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0046907 | intracellular transport | IEP | Neighborhood |
| MF | GO:0051020 | GTPase binding | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| BP | GO:0051641 | cellular localization | IEP | Neighborhood |
| BP | GO:0051649 | establishment of localization in cell | IEP | Neighborhood |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Neighborhood |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Neighborhood |
| BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
| BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
| BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |