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  5. GSVIVT01002021001

GSVIVT01002021001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase


Gene families : OG0001188 (Archaeplastida) Phylogenetic Tree(s): OG0001188_tree ,
OG_05_0001068 (LandPlants) Phylogenetic Tree(s): OG_05_0001068_tree ,
OG_06_0000881 (SeedPlants) Phylogenetic Tree(s): OG_06_0000881_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01002021001
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AT3G47160 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Gb_19577 No alias RING-HC-class E3 ligase 0.02 Archaeplastida
LOC_Os04g58320.2 No alias RING-HC-class E3 ligase 0.04 Archaeplastida
LOC_Os10g30850.1 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
Mp6g12970.1 No alias RING-HC-class E3 ligase 0.05 Archaeplastida
Solyc02g078460.3.1 No alias RING-HC-class E3 ligase 0.07 Archaeplastida
Zm00001e004453_P001 No alias RING-HC-class E3 ligase 0.05 Archaeplastida
Zm00001e004685_P002 No alias RING-HC-class E3 ligase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!