GSVIVT01002242001

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor

Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0000055 (SeedPlants) Phylogenetic Tree(s): OG_06_0000055_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01002242001
Cluster	HCCA: Cluster_203

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00248860	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
AMTR_s00021p00057700	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
AMTR_s00119p00099150	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
AMTR_s00160p00038440	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AT1G21340	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Archaeplastida
AT1G29160	No alias	Dof-type zinc finger DNA-binding family protein	0.07	Archaeplastida
AT2G34140	No alias	Dof-type zinc finger DNA-binding family protein	0.05	Archaeplastida
AT2G46590	DAG2	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT5G02460	No alias	Dof-type zinc finger DNA-binding family protein	0.05	Archaeplastida
AT5G60200	TMO6	TARGET OF MONOPTEROS 6	0.03	Archaeplastida
AT5G62940	HCA2, DOF5.6	Dof-type zinc finger DNA-binding family protein	0.06	Archaeplastida
AT5G65590	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Archaeplastida
GSVIVT01027184001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
LOC_Os02g15350.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
LOC_Os02g47810.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os03g16850.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os03g60630.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os04g58190.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
LOC_Os08g38220.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
LOC_Os10g35300.2	No alias	transcription factor (DOF)	0.04	Archaeplastida
MA_123810g0010	No alias	transcription factor (DOF)	0.05	Archaeplastida
MA_7537g0010	No alias	transcription factor (DOF)	0.03	Archaeplastida
Mp2g20790.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Pp3c14_24190V3.1	No alias	cycling DOF factor 3	0.03	Archaeplastida
Pp3c16_6460V3.1	No alias	cycling DOF factor 2	0.04	Archaeplastida
Pp3c17_23300V3.1	No alias	cycling DOF factor 3	0.02	Archaeplastida
Pp3c17_7930V3.1	No alias	cycling DOF factor 2	0.03	Archaeplastida
Pp3c9_4910V3.1	No alias	cycling DOF factor 2	0.04	Archaeplastida
Smo29617	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
Smo89924	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
Solyc02g076850.2.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc02g090220.3.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
Solyc03g082840.3.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc03g112930.3.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc03g121400.1.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc06g076030.3.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc08g082910.2.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc10g009360.4.1	No alias	transcription factor (DOF)	0.08	Archaeplastida
Solyc10g086440.2.1	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e001988_P001	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e002951_P002	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e004476_P002	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e005107_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e005785_P001	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e006190_P001	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e010022_P001	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e015414_P004	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e027411_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e028042_P002	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e028672_P001	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e035074_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	15	68

External Links

No external refs found!

GSVIVT01002242001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation