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  5. GSVIVT01002530001

GSVIVT01002530001


Description : Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana


Gene families : OG0011485 (Archaeplastida) Phylogenetic Tree(s): OG0011485_tree ,
OG_05_0007382 (LandPlants) Phylogenetic Tree(s): OG_05_0007382_tree ,
OG_06_0002470 (SeedPlants) Phylogenetic Tree(s): OG_06_0002470_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01002530001
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00261060 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g49710... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 554 605
IPR002885 Pentatricopeptide_repeat 381 428
IPR002885 Pentatricopeptide_repeat 103 152
IPR002885 Pentatricopeptide_repeat 204 250
IPR002885 Pentatricopeptide_repeat 305 354
IPR002885 Pentatricopeptide_repeat 177 199
IPR002885 Pentatricopeptide_repeat 455 479
IPR002885 Pentatricopeptide_repeat 522 550
IPR002885 Pentatricopeptide_repeat 75 100
No external refs found!