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Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor
Gene families : OG0000200 (Archaeplastida) Phylogenetic Tree(s): OG0000200_tree ,
OG_05_0000106 (LandPlants) Phylogenetic Tree(s): OG_05_0000106_tree ,
OG_06_0000058 (SeedPlants) Phylogenetic Tree(s): OG_06_0000058_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01003119001 | |
| Cluster | HCCA: Cluster_204 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00059p00106830 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.04 | Archaeplastida | |
| AT1G55110 | AtIDD7, IDD7 | indeterminate(ID)-domain 7 | 0.03 | Archaeplastida | |
| AT3G45260 | No alias | C2H2-like zinc finger protein | 0.05 | Archaeplastida | |
| AT3G50700 | IDD2, AtIDD2 | indeterminate(ID)-domain 2 | 0.02 | Archaeplastida | |
| AT5G44160 | NUC | C2H2-like zinc finger protein | 0.05 | Archaeplastida | |
| GSVIVT01009680001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | Archaeplastida | |
| GSVIVT01020612001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | Archaeplastida | |
| GSVIVT01025658001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | Archaeplastida | |
| Gb_17209 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida | |
| LOC_Os01g39110.1 | No alias | C2H2 zinc finger transcription factor | 0.05 | Archaeplastida | |
| LOC_Os01g51590.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| LOC_Os07g39310.1 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
| LOC_Os08g36390.1 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
| Mp1g15660.1 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida | |
| Mp5g20530.1 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida | |
| Pp3c2_20240V3.1 | No alias | indeterminate(ID)-domain 2 | 0.02 | Archaeplastida | |
| Solyc02g085580.4.1 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
| Solyc07g053570.4.1 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
| Solyc09g007550.3.1 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
| Solyc11g069240.2.1 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
| Zm00001e004751_P001 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
| Zm00001e010628_P002 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
| Zm00001e016559_P001 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
| Zm00001e018716_P001 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
| Zm00001e027791_P001 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida | |
| Zm00001e034898_P001 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida | |
| Zm00001e035365_P003 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
| MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0015858 | nucleoside transport | IEP | Neighborhood |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Neighborhood |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0016301 | kinase activity | IEP | Neighborhood |
| BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| BP | GO:1901264 | carbohydrate derivative transport | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1901642 | nucleoside transmembrane transport | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |