- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : evm_27.TU.AmTr_v1.0_scaffold00034.78
Description : Protein degradation.peptide tagging.Ubiquitin-fold-modifier (UFM)-anchor addition.UFM ligase E3 protein
Gene families : OG0003408 (Archaeplastida) Phylogenetic Tree(s): OG0003408_tree ,
OG_05_0003363 (LandPlants) Phylogenetic Tree(s): OG_05_0003363_tree ,
OG_06_0010104 (SeedPlants) Phylogenetic Tree(s): OG_06_0010104_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00034p00207810 | |
| Cluster | HCCA: Cluster_89 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Zm00001e029565_P001 | No alias | UFM ligase E3 protein | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005319 | lipid transporter activity | IEP | Neighborhood |
| MF | GO:0005342 | organic acid transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0005343 | organic acid:sodium symporter activity | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| BP | GO:0006814 | sodium ion transport | IEP | Neighborhood |
| MF | GO:0008028 | monocarboxylic acid transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0008508 | bile acid:sodium symporter activity | IEP | Neighborhood |
| MF | GO:0008509 | anion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0008514 | organic anion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015081 | sodium ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015125 | bile acid transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015293 | symporter activity | IEP | Neighborhood |
| MF | GO:0015294 | solute:cation symporter activity | IEP | Neighborhood |
| MF | GO:0015355 | secondary active monocarboxylate transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015370 | solute:sodium symporter activity | IEP | Neighborhood |
| BP | GO:0015672 | monovalent inorganic cation transport | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| CC | GO:0030684 | preribosome | IEP | Neighborhood |
| CC | GO:0032040 | small-subunit processome | IEP | Neighborhood |
| BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0046943 | carboxylic acid transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0140161 | monocarboxylate:sodium symporter activity | IEP | Neighborhood |
| MF | GO:1901618 | organic hydroxy compound transmembrane transporter activity | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR018611 | E3_UFM1_ligase_1 | 4 | 289 |
| No external refs found! |