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  5. GSVIVT01003437001

GSVIVT01003437001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000509 (Archaeplastida) Phylogenetic Tree(s): OG0000509_tree ,
OG_05_0000283 (LandPlants) Phylogenetic Tree(s): OG_05_0000283_tree ,
OG_06_0000646 (SeedPlants) Phylogenetic Tree(s): OG_06_0000646_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01003437001
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00198780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00015p00239460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT1G22490 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
Gb_17233 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os02g15760.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os02g46560.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os04g50090.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os08g37730.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os09g29360.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_120602g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
Pp3c22_14220V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Smo91359 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Solyc05g053660.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e009989_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e023271_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 108 159
No external refs found!