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Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor
Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0000043 (SeedPlants) Phylogenetic Tree(s): OG_06_0000043_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01003546001 | |
| Cluster | HCCA: Cluster_65 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00187850 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | Archaeplastida | |
| AMTR_s00076p00127530 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.05 | Archaeplastida | |
| AT1G06280 | LBD2 | LOB domain-containing protein 2 | 0.05 | Archaeplastida | |
| AT1G65620 | AS2 | Lateral organ boundaries (LOB) domain family protein | 0.03 | Archaeplastida | |
| AT2G28500 | LBD11 | LOB domain-containing protein 11 | 0.03 | Archaeplastida | |
| AT5G63090 | LOB | Lateral organ boundaries (LOB) domain family protein | 0.04 | Archaeplastida | |
| GSVIVT01003548001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | Archaeplastida | |
| GSVIVT01006269001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | Archaeplastida | |
| GSVIVT01013631001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | Archaeplastida | |
| GSVIVT01016330001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | Archaeplastida | |
| GSVIVT01024662001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.05 | Archaeplastida | |
| GSVIVT01032714001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.05 | Archaeplastida | |
| Gb_03653 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Gb_08465 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| Gb_16914 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| Gb_19384 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| Gb_20676 | No alias | transcription factor (AS2/LOB) | 0.04 | Archaeplastida | |
| Gb_21467 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Gb_23794 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Gb_29853 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| Gb_40684 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| Gb_40767 | No alias | transcription factor (AS2/LOB) | 0.05 | Archaeplastida | |
| LOC_Os01g14030.1 | No alias | transcription factor (AS2/LOB) | 0.05 | Archaeplastida | |
| LOC_Os03g17810.1 | No alias | transcription factor (AS2/LOB) | 0.04 | Archaeplastida | |
| LOC_Os05g07270.1 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| LOC_Os05g27980.1 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| MA_10434782g0020 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| MA_16646g0010 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| MA_16891g0010 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| MA_185511g0010 | No alias | transcription factor (AS2/LOB) | 0.01 | Archaeplastida | |
| MA_66501g0010 | No alias | transcription factor (AS2/LOB) | 0.04 | Archaeplastida | |
| MA_88711g0010 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Mp1g14500.1 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| Mp7g17250.1 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| Mp8g09250.1 | No alias | transcription factor (AS2/LOB) | 0.01 | Archaeplastida | |
| Solyc05g048740.3.1 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Solyc06g082310.3.1 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Solyc12g010810.1.1 | No alias | transcription factor (AS2/LOB) | 0.06 | Archaeplastida | |
| Zm00001e019004_P002 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Zm00001e026736_P001 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Zm00001e030195_P001 | No alias | transcription factor (AS2/LOB) | 0.04 | Archaeplastida | |
| Zm00001e031510_P001 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0004601 | peroxidase activity | IEP | Neighborhood |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | Neighborhood |
| BP | GO:0006281 | DNA repair | IEP | Neighborhood |
| BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
| BP | GO:0006486 | protein glycosylation | IEP | Neighborhood |
| BP | GO:0006873 | cellular ion homeostasis | IEP | Neighborhood |
| BP | GO:0006875 | cellular metal ion homeostasis | IEP | Neighborhood |
| BP | GO:0006879 | cellular iron ion homeostasis | IEP | Neighborhood |
| BP | GO:0006950 | response to stress | IEP | Neighborhood |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
| BP | GO:0006979 | response to oxidative stress | IEP | Neighborhood |
| MF | GO:0008199 | ferric iron binding | IEP | Neighborhood |
| BP | GO:0008272 | sulfate transport | IEP | Neighborhood |
| MF | GO:0015116 | sulfate transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0016209 | antioxidant activity | IEP | Neighborhood |
| MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Neighborhood |
| MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Neighborhood |
| CC | GO:0019867 | outer membrane | IEP | Neighborhood |
| MF | GO:0020037 | heme binding | IEP | Neighborhood |
| BP | GO:0030003 | cellular cation homeostasis | IEP | Neighborhood |
| MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
| CC | GO:0031968 | organelle outer membrane | IEP | Neighborhood |
| BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
| MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | Neighborhood |
| BP | GO:0043413 | macromolecule glycosylation | IEP | Neighborhood |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
| BP | GO:0046916 | cellular transition metal ion homeostasis | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| BP | GO:0048878 | chemical homeostasis | IEP | Neighborhood |
| BP | GO:0050801 | ion homeostasis | IEP | Neighborhood |
| BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
| BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
| BP | GO:0055065 | metal ion homeostasis | IEP | Neighborhood |
| BP | GO:0055072 | iron ion homeostasis | IEP | Neighborhood |
| BP | GO:0055076 | transition metal ion homeostasis | IEP | Neighborhood |
| BP | GO:0055080 | cation homeostasis | IEP | Neighborhood |
| BP | GO:0055082 | cellular chemical homeostasis | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| BP | GO:0070085 | glycosylation | IEP | Neighborhood |
| BP | GO:0072348 | sulfur compound transport | IEP | Neighborhood |
| CC | GO:0098588 | bounding membrane of organelle | IEP | Neighborhood |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | Neighborhood |
| CC | GO:0098805 | whole membrane | IEP | Neighborhood |
| MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Neighborhood |
| MF | GO:1901682 | sulfur compound transmembrane transporter activity | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004883 | LOB | 7 | 103 |
| No external refs found! |