Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor
Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0000043 (SeedPlants) Phylogenetic Tree(s): OG_06_0000043_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01003548001 | |
Cluster | HCCA: Cluster_144 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00032p00142260 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | Archaeplastida | |
AMTR_s00076p00127530 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | Archaeplastida | |
AT2G28500 | LBD11 | LOB domain-containing protein 11 | 0.02 | Archaeplastida | |
GSVIVT01003546001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | Archaeplastida | |
GSVIVT01004323001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | Archaeplastida | |
Gb_21467 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
Gb_22180 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
Gb_38978 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
MA_136689g0010 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
MA_16646g0010 | No alias | transcription factor (AS2/LOB) | 0.05 | Archaeplastida | |
Pp3c20_10200V3.1 | No alias | Lateral organ boundaries (LOB) domain family protein | 0.02 | Archaeplastida | |
Solyc02g067800.4.1 | No alias | transcription factor (AS2/LOB) | 0.05 | Archaeplastida | |
Zm00001e016785_P005 | No alias | transcription factor (AS2/LOB) | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0004180 | carboxypeptidase activity | IEP | Neighborhood |
MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Neighborhood |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0006508 | proteolysis | IEP | Neighborhood |
MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
MF | GO:0008238 | exopeptidase activity | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
MF | GO:0070008 | serine-type exopeptidase activity | IEP | Neighborhood |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004883 | LOB | 7 | 103 |
No external refs found! |