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  5. GSVIVT01003684001

GSVIVT01003684001


Description : Solute transport.carrier-mediated transport.APC superfamily.APC family.cationic amino acid transporter (CAT-type)


Gene families : OG0000547 (Archaeplastida) Phylogenetic Tree(s): OG0000547_tree ,
OG_05_0002054 (LandPlants) Phylogenetic Tree(s): OG_05_0002054_tree ,
OG_06_0001934 (SeedPlants) Phylogenetic Tree(s): OG_06_0001934_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01003684001
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00049320 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
AMTR_s00114p00137590 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
GSVIVT01021611001 No alias Solute transport.carrier-mediated transport.APC... 0.02 Archaeplastida
GSVIVT01034656001 No alias Solute transport.carrier-mediated transport.APC... 0.05 Archaeplastida
LOC_Os03g43970.1 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida
LOC_Os12g41890.1 No alias cationic amino acid transporter (CAT) 0.04 Archaeplastida
MA_10429855g0010 No alias cationic amino acid transporter (CAT) 0.04 Archaeplastida
MA_10433254g0010 No alias Cationic amino acid transporter 1 OS=Arabidopsis... 0.04 Archaeplastida
MA_10433254g0020 No alias cationic amino acid transporter (CAT) 0.07 Archaeplastida
MA_453630g0010 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida
Pp3c20_7420V3.1 No alias amino acid transporter 1 0.04 Archaeplastida
Pp3c5_24930V3.1 No alias cationic amino acid transporter 6 0.02 Archaeplastida
Zm00001e018123_P001 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 12 323
No external refs found!