GSVIVT01003841001


No description available


Gene families : OG0002806 (Archaeplastida) Phylogenetic Tree(s): OG0002806_tree ,
OG_05_0003454 (LandPlants) Phylogenetic Tree(s): OG_05_0003454_tree ,
OG_06_0002415 (SeedPlants) Phylogenetic Tree(s): OG_06_0002415_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01003841001
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00133200 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT5G23690 No alias Polynucleotide adenylyltransferase family protein 0.04 Archaeplastida
Solyc01g009670.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g082810.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g032180.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc03g097830.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR032828 PolyA_RNA-bd 193 251
IPR002646 PolA_pol_head_dom 37 166
No external refs found!