1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01003898001

GSVIVT01003898001


Description : Putative F-box protein PP2-B12 OS=Arabidopsis thaliana


Gene families : OG0000117 (Archaeplastida) Phylogenetic Tree(s): OG0000117_tree ,
OG_05_0000081 (LandPlants) Phylogenetic Tree(s): OG_05_0000081_tree ,
OG_06_0000096 (SeedPlants) Phylogenetic Tree(s): OG_06_0000096_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01003898001
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AT1G56240 PP2-B13, AtPP2-B13 phloem protein 2-B13 0.01 Archaeplastida
AT1G56250 PP2-B14, AtPP2-B14 phloem protein 2-B14 0.02 Archaeplastida
AT2G02310 AtPP2-B6, PP2-B6 phloem protein 2-B6 0.02 Archaeplastida
LOC_Os02g56810.1 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_10434357g0020 No alias F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_22084g0010 No alias F-box protein At2g02240 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_9816715g0010 No alias Putative F-box protein PP2-B8 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc01g100010.3.1 No alias F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc04g056680.2.1 No alias F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc12g096890.1.1 No alias F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e041427_P001 No alias component FBX of SCF E3 ubiquitin ligase complex 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
InterPro domains Description Start Stop
IPR025886 PP2-like 198 323
No external refs found!