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AT1G47610


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG0000380 (Archaeplastida) Phylogenetic Tree(s): OG0000380_tree ,
OG_05_0000225 (LandPlants) Phylogenetic Tree(s): OG_05_0000225_tree ,
OG_06_0000140 (SeedPlants) Phylogenetic Tree(s): OG_06_0000140_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G47610
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00135240 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00156p00066850 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01007825001 No alias No description available 0.04 Archaeplastida
GSVIVT01035639001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_33494 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_1936904g0010 No alias No annotation 0.04 Archaeplastida
MA_6069993g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 Archaeplastida
Pp3c11_2770V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005834 heterotrimeric G-protein complex ISS Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP Neighborhood
BP GO:0003002 regionalization IEP Neighborhood
MF GO:0004567 beta-mannosidase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Neighborhood
BP GO:0009624 response to nematode IEP Neighborhood
BP GO:0009886 post-embryonic animal morphogenesis IEP Neighborhood
CC GO:0009897 external side of plasma membrane IEP Neighborhood
BP GO:0009913 epidermal cell differentiation IEP Neighborhood
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP Neighborhood
BP GO:0010093 specification of floral organ identity IEP Neighborhood
BP GO:0010222 stem vascular tissue pattern formation IEP Neighborhood
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Neighborhood
MF GO:0015245 fatty acid transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015718 monocarboxylic acid transport IEP Neighborhood
BP GO:0015908 fatty acid transport IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
MF GO:0016985 mannan endo-1,4-beta-mannosidase activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030497 fatty acid elongation IEP Neighborhood
BP GO:0030855 epithelial cell differentiation IEP Neighborhood
BP GO:0042335 cuticle development IEP Neighborhood
BP GO:0048437 floral organ development IEP Neighborhood
BP GO:0048440 carpel development IEP Neighborhood
BP GO:0048441 petal development IEP Neighborhood
BP GO:0048443 stamen development IEP Neighborhood
BP GO:0048481 plant ovule development IEP Neighborhood
BP GO:0048507 meristem development IEP Neighborhood
BP GO:0048827 phyllome development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0051119 sugar transmembrane transporter activity IEP Neighborhood
BP GO:0065001 specification of axis polarity IEP Neighborhood
CC GO:0071944 cell periphery IEP Neighborhood
BP GO:0080051 cutin transport IEP Neighborhood
BP GO:0090701 specification of plant organ identity IEP Neighborhood
CC GO:0098552 side of membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 168 203
IPR001680 WD40_repeat 51 89
IPR001680 WD40_repeat 299 346
IPR001680 WD40_repeat 134 162
IPR001680 WD40_repeat 24 50
No external refs found!