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  5. GSVIVT01004104001

GSVIVT01004104001


Description : External stimuli response.gravity.sensing and signalling.SHR transcription factor


Gene families : OG0006923 (Archaeplastida) Phylogenetic Tree(s): OG0006923_tree ,
OG_05_0004840 (LandPlants) Phylogenetic Tree(s): OG_05_0004840_tree ,
OG_06_0004404 (SeedPlants) Phylogenetic Tree(s): OG_06_0004404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01004104001
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00182770 evm_27.TU.AmTr_v1... External stimuli response.gravity.sensing and... 0.03 Archaeplastida
AT4G37650 SHR, SGR7 GRAS family transcription factor 0.03 Archaeplastida
Pp3c7_24880V3.1 No alias GRAS family transcription factor 0.03 Archaeplastida
Solyc02g092370.1.1 No alias transcription factor (GRAS). SHR gravity signalling... 0.07 Archaeplastida
Zm00001e002085_P001 No alias transcription factor (GRAS). SHR gravity signalling... 0.03 Archaeplastida
Zm00001e035411_P001 No alias transcription factor (GRAS). SHR gravity signalling... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005202 TF_GRAS 60 435
No external refs found!