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  5. AMTR_s00034p00242520

AMTR_s00034p00242520 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00034.136

No description available


Gene families : OG0001244 (Archaeplastida) Phylogenetic Tree(s): OG0001244_tree ,
OG_05_0000805 (LandPlants) Phylogenetic Tree(s): OG_05_0000805_tree ,
OG_06_0010875 (SeedPlants) Phylogenetic Tree(s): OG_06_0010875_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00034p00242520
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Gb_38190 No alias no hits & (original description: none) 0.13 Archaeplastida
MA_10188586g0010 No alias No annotation 0.02 Archaeplastida
MA_9370877g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g18360.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp8g14650.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c15_3050V3.1 No alias GTP-binding protein Obg/CgtA 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR022212 DUF3741 200 245
IPR025486 DUF4378 884 1038
No external refs found!