GSVIVT01004272001

Description : Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica

Gene families : OG0001092 (Archaeplastida) Phylogenetic Tree(s): OG0001092_tree ,
OG_05_0000685 (LandPlants) Phylogenetic Tree(s): OG_05_0000685_tree ,
OG_06_0000635 (SeedPlants) Phylogenetic Tree(s): OG_06_0000635_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01004272001
Cluster	HCCA: Cluster_216

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00061p00200560	evm_27.TU.AmTr_v1...	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.05	Archaeplastida
GSVIVT01002911001	No alias	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.04	Archaeplastida
GSVIVT01006760001	No alias	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.02	Archaeplastida
GSVIVT01007038001	No alias	Cellulose synthase-like protein E1 OS=Arabidopsis thaliana	0.05	Archaeplastida
GSVIVT01007039001	No alias	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.09	Archaeplastida
GSVIVT01007042001	No alias	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.05	Archaeplastida
Gb_25252	No alias	Cellulose synthase-like protein E1 OS=Oryza sativa...	0.03	Archaeplastida
MA_10426044g0010	No alias	Cellulose synthase-like protein E1 OS=Oryza sativa...	0.02	Archaeplastida
MA_10430098g0010	No alias	Cellulose synthase-like protein E1 OS=Arabidopsis...	0.02	Archaeplastida
MA_10436687g0010	No alias	Cellulose synthase-like protein E1 OS=Oryza sativa...	0.03	Archaeplastida
MA_264460g0010	No alias	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
MF	GO:0016846	carbon-sulfur lyase activity	IEP	Neighborhood
MF	GO:0043531	ADP binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	112	352

External Links

No external refs found!

GSVIVT01004272001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation