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  5. GSVIVT01004302001

GSVIVT01004302001


Description : Serine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana


Gene families : OG0006039 (Archaeplastida) Phylogenetic Tree(s): OG0006039_tree ,
OG_05_0008926 (LandPlants) Phylogenetic Tree(s): OG_05_0008926_tree ,
OG_06_0009593 (SeedPlants) Phylogenetic Tree(s): OG_06_0009593_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01004302001
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00223180 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 Archaeplastida
AT1G11870 ATSRS, OVA7, SRS Seryl-tRNA synthetase 0.05 Archaeplastida
Cre02.g082825 No alias Serine--tRNA ligase, chloroplastic/mitochondrial... 0.02 Archaeplastida
Cre02.g082877 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 Archaeplastida
MA_10434176g0010 No alias Serine--tRNA ligase, chloroplastic/mitochondrial... 0.03 Archaeplastida
Mp6g09660.1 No alias serine-tRNA ligase 0.04 Archaeplastida
Pp3c5_28560V3.1 No alias Seryl-tRNA synthetase 0.02 Archaeplastida
Solyc04g074630.4.1 No alias serine-tRNA ligase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003873 6-phosphofructo-2-kinase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006000 fructose metabolic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009235 cobalamin metabolic process IEP Neighborhood
BP GO:0009236 cobalamin biosynthetic process IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016852 sirohydrochlorin cobaltochelatase activity IEP Neighborhood
MF GO:0019200 carbohydrate kinase activity IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood
InterPro domains Description Start Stop
IPR015866 Ser-tRNA-synth_1_N 84 187
No external refs found!