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Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor
Gene families : OG0000184 (Archaeplastida) Phylogenetic Tree(s): OG0000184_tree ,
OG_05_0003886 (LandPlants) Phylogenetic Tree(s): OG_05_0003886_tree ,
OG_06_0002813 (SeedPlants) Phylogenetic Tree(s): OG_06_0002813_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01004405001 | |
| Cluster | HCCA: Cluster_11 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00016p00170610 | evm_27.TU.AmTr_v1... | External stimuli response.temperature.ICE-CBF cold... | 0.03 | Archaeplastida | |
| AMTR_s00019p00254380 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
| AT3G26744 | ATICE1, ICE1, SCRM | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| AT4G21330 | DYT1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | Archaeplastida | |
| GSVIVT01009234001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.01 | Archaeplastida | |
| GSVIVT01013744001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.05 | Archaeplastida | |
| GSVIVT01013745001 | No alias | Transcription factor bHLH90 OS=Arabidopsis thaliana | 0.05 | Archaeplastida | |
| Gb_05276 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Gb_15579 | No alias | transcription factor (bHLH) | 0.05 | Archaeplastida | |
| LOC_Os02g02820.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| LOC_Os10g39750.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| LOC_Os11g32100.1 | No alias | transcription factor (bHLH). transcription factor (ICE1|2) | 0.04 | Archaeplastida | |
| MA_439607g0010 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| MA_63506g0010 | No alias | transcription factor (bHLH). transcription factor (ICE1|2) | 0.05 | Archaeplastida | |
| Mp2g02460.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Mp4g04920.1 | No alias | transcription factor (bHLH). transcription factor (ICE1|2) | 0.02 | Archaeplastida | |
| Pp3c13_14400V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| Pp3c13_14420V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| Pp3c1_20960V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | Archaeplastida | |
| Pp3c8_18070V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| Smo431375 | No alias | No description available | 0.04 | Archaeplastida | |
| Solyc02g079810.3.1 | No alias | transcription factor (bHLH) | 0.05 | Archaeplastida | |
| Solyc02g091690.3.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Solyc05g005300.2.1 | No alias | transcription factor (bHLH) | 0.05 | Archaeplastida | |
| Solyc06g051550.4.1 | No alias | transcription factor (bHLH). iron uptake transcription factor FIT | 0.05 | Archaeplastida | |
| Solyc12g088130.3.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Zm00001e013304_P003 | No alias | transcription factor (bHLH) | 0.05 | Archaeplastida | |
| Zm00001e040186_P002 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0004650 | polygalacturonase activity | IEP | Neighborhood |
| MF | GO:0004664 | prephenate dehydratase activity | IEP | Neighborhood |
| MF | GO:0005215 | transporter activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| BP | GO:0006479 | protein methylation | IEP | Neighborhood |
| BP | GO:0006558 | L-phenylalanine metabolic process | IEP | Neighborhood |
| BP | GO:0006629 | lipid metabolic process | IEP | Neighborhood |
| BP | GO:0006810 | transport | IEP | Neighborhood |
| BP | GO:0006811 | ion transport | IEP | Neighborhood |
| BP | GO:0006812 | cation transport | IEP | Neighborhood |
| BP | GO:0007165 | signal transduction | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0008213 | protein alkylation | IEP | Neighborhood |
| MF | GO:0008276 | protein methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Neighborhood |
| BP | GO:0009094 | L-phenylalanine biosynthetic process | IEP | Neighborhood |
| BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Neighborhood |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015077 | monovalent inorganic cation transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015297 | antiporter activity | IEP | Neighborhood |
| CC | GO:0016021 | integral component of membrane | IEP | Neighborhood |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0016458 | gene silencing | IEP | Neighborhood |
| BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
| BP | GO:0016570 | histone modification | IEP | Neighborhood |
| BP | GO:0016571 | histone methylation | IEP | Neighborhood |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
| MF | GO:0016872 | intramolecular lyase activity | IEP | Neighborhood |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Neighborhood |
| MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Neighborhood |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0031047 | gene silencing by RNA | IEP | Neighborhood |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Neighborhood |
| BP | GO:0034968 | histone lysine methylation | IEP | Neighborhood |
| MF | GO:0042054 | histone methyltransferase activity | IEP | Neighborhood |
| BP | GO:0043414 | macromolecule methylation | IEP | Neighborhood |
| CC | GO:0044425 | membrane part | IEP | Neighborhood |
| BP | GO:0051179 | localization | IEP | Neighborhood |
| BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
| BP | GO:0055085 | transmembrane transport | IEP | Neighborhood |
| BP | GO:1902221 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process | IEP | Neighborhood |
| BP | GO:1902223 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |