1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01004595001

GSVIVT01004595001


Description : Cell wall.cell wall proteins.expansins.beta-like-type expansin


Gene families : OG0004259 (Archaeplastida) Phylogenetic Tree(s): OG0004259_tree ,
OG_05_0002947 (LandPlants) Phylogenetic Tree(s): OG_05_0002947_tree ,
OG_06_0001704 (SeedPlants) Phylogenetic Tree(s): OG_06_0001704_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01004595001
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00195390 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.04 Archaeplastida
LOC_Os07g31390.1 No alias beta-like-class expansin 0.03 Archaeplastida
Solyc06g060970.2.1 No alias beta-like-class expansin 0.05 Archaeplastida
Solyc08g007090.3.1 No alias Expansin-like B1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Solyc08g077330.3.1 No alias beta-like-class expansin 0.04 Archaeplastida
Solyc08g077910.3.1 No alias beta-like-class expansin 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006528 asparagine metabolic process IEP Neighborhood
BP GO:0006529 asparagine biosynthetic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 151 234
IPR009009 RlpA-like_DPBB 67 124
No external refs found!