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  5. GSVIVT01004860001

GSVIVT01004860001


Description : RNA biosynthesis.transcriptional activation.CAMTA transcription factor


Gene families : OG0000551 (Archaeplastida) Phylogenetic Tree(s): OG0000551_tree ,
OG_05_0000809 (LandPlants) Phylogenetic Tree(s): OG_05_0000809_tree ,
OG_06_0001322 (SeedPlants) Phylogenetic Tree(s): OG_06_0001322_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01004860001
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00173360 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.CAMTA... 0.04 Archaeplastida
AMTR_s00057p00042800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.CAMTA... 0.03 Archaeplastida
AT1G67310 No alias Calmodulin-binding transcription activator protein with... 0.05 Archaeplastida
AT3G16940 No alias calmodulin binding;transcription regulators 0.04 Archaeplastida
AT4G16150 No alias calmodulin binding;transcription regulators 0.07 Archaeplastida
AT5G64220 No alias Calmodulin-binding transcription activator protein with... 0.03 Archaeplastida
Gb_04014 No alias transcription factor (CAMTA) 0.05 Archaeplastida
Gb_11889 No alias transcription factor (CAMTA) 0.04 Archaeplastida
LOC_Os01g69910.1 No alias transcription factor (CAMTA) 0.06 Archaeplastida
LOC_Os03g09100.1 No alias transcription factor (CAMTA) 0.03 Archaeplastida
LOC_Os03g27080.1 No alias transcription factor (CAMTA) 0.06 Archaeplastida
LOC_Os04g31900.1 No alias transcription factor (CAMTA) 0.06 Archaeplastida
LOC_Os07g30774.1 No alias transcription factor (CAMTA) 0.05 Archaeplastida
LOC_Os10g22950.1 No alias transcription factor (CAMTA) 0.04 Archaeplastida
MA_10437204g0010 No alias transcription factor (CAMTA) 0.03 Archaeplastida
Mp7g03150.1 No alias transcription factor (CAMTA) 0.02 Archaeplastida
Pp3c4_5270V3.1 No alias signal responsive 1 0.05 Archaeplastida
Pp3c8_2690V3.1 No alias Calmodulin-binding transcription activator protein with... 0.05 Archaeplastida
Solyc01g060140.4.1 No alias transcription factor (CAMTA) 0.04 Archaeplastida
Solyc01g105230.4.1 No alias transcription factor (CAMTA) 0.08 Archaeplastida
Solyc04g056270.4.1 No alias transcription factor (CAMTA) 0.03 Archaeplastida
Solyc05g015650.3.1 No alias transcription factor (CAMTA) 0.04 Archaeplastida
Zm00001e002794_P002 No alias transcription factor (CAMTA) 0.06 Archaeplastida
Zm00001e008367_P002 No alias transcription factor (CAMTA) 0.03 Archaeplastida
Zm00001e012888_P005 No alias transcription factor (CAMTA) 0.08 Archaeplastida
Zm00001e037974_P002 No alias transcription factor (CAMTA) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0004057 arginyltransferase activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006013 mannose metabolic process IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
BP GO:0016598 protein arginylation IEP Neighborhood
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002909 IPT_dom 664 749
IPR005559 CG-1_dom 224 305
IPR020683 Ankyrin_rpt-contain_dom 869 960
IPR000048 IQ_motif_EF-hand-BS 1093 1112
IPR000048 IQ_motif_EF-hand-BS 1069 1088
No external refs found!