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  5. GSVIVT01004862001

GSVIVT01004862001


Description : Cell wall.hemicellulose.xylan.modification and degradation.glucuronoxylan 4-O-methyltransferase


Gene families : OG0000727 (Archaeplastida) Phylogenetic Tree(s): OG0000727_tree ,
OG_05_0000525 (LandPlants) Phylogenetic Tree(s): OG_05_0000525_tree ,
OG_06_0001137 (SeedPlants) Phylogenetic Tree(s): OG_06_0001137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01004862001
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00175910 evm_27.TU.AmTr_v1... Probable methyltransferase At1g27930 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00051p00191940 evm_27.TU.AmTr_v1... Protein IRREGULAR XYLEM 15 OS=Arabidopsis thaliana 0.06 Archaeplastida
AMTR_s00099p00012720 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xylan.modification and... 0.07 Archaeplastida
AT1G09610 No alias Protein of unknown function (DUF579) 0.14 Archaeplastida
AT1G33800 No alias Protein of unknown function (DUF579) 0.05 Archaeplastida
AT1G71690 No alias Protein of unknown function (DUF579) 0.05 Archaeplastida
AT2G15440 No alias Protein of unknown function (DUF579) 0.04 Archaeplastida
AT3G50220 No alias Protein of unknown function (DUF579) 0.13 Archaeplastida
AT5G67210 No alias Protein of unknown function (DUF579) 0.12 Archaeplastida
Gb_12265 No alias glucuronoxylan 4-O-methyltransferase 0.07 Archaeplastida
Gb_31046 No alias glucuronoxylan 4-O-methyltransferase 0.1 Archaeplastida
Gb_35413 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.11 Archaeplastida
LOC_Os02g06380.1 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.08 Archaeplastida
LOC_Os04g55640.1 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os05g37530.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g47310.1 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os11g13870.1 No alias Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis... 0.03 Archaeplastida
MA_10430239g0010 No alias glucuronoxylan 4-O-methyltransferase 0.09 Archaeplastida
MA_195978g0010 No alias Probable methyltransferase At1g27930 OS=Arabidopsis... 0.07 Archaeplastida
MA_58340g0010 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.1 Archaeplastida
Smo57632 No alias Glucuronoxylan 4-O-methyltransferase 1 OS=Arabidopsis thaliana 0.1 Archaeplastida
Solyc01g103360.4.1 No alias glucuronoxylan 4-O-methyltransferase 0.13 Archaeplastida
Solyc02g064945.1.1 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.16 Archaeplastida
Solyc02g093090.1.1 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.12 Archaeplastida
Solyc03g110890.1.1 No alias Probable methyltransferase At1g27930 OS=Arabidopsis... 0.04 Archaeplastida
Solyc06g064800.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc11g031950.1.1 No alias glucuronoxylan 4-O-methyltransferase 0.09 Archaeplastida
Zm00001e011047_P001 No alias Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis... 0.11 Archaeplastida
Zm00001e013082_P001 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e013688_P001 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.11 Archaeplastida
Zm00001e039770_P002 No alias glucuronoxylan 4-O-methyltransferase 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Neighborhood
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
CC GO:0005885 Arp2/3 protein complex IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006546 glycine catabolic process IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0007015 actin filament organization IEP Neighborhood
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009071 serine family amino acid catabolic process IEP Neighborhood
BP GO:0009086 methionine biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0010638 positive regulation of organelle organization IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
CC GO:0015629 actin cytoskeleton IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
BP GO:0030838 positive regulation of actin filament polymerization IEP Neighborhood
BP GO:0031334 positive regulation of protein complex assembly IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032273 positive regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
BP GO:0042135 neurotransmitter catabolic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044089 positive regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0045010 actin nucleation IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051495 positive regulation of cytoskeleton organization IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0097435 supramolecular fiber organization IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Neighborhood
InterPro domains Description Start Stop
IPR021148 Polysacc_synth_dom 103 285
No external refs found!