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  5. GSVIVT01004902001

GSVIVT01004902001


Description : Pentatricopeptide repeat-containing protein At4g22760 OS=Arabidopsis thaliana


Gene families : OG0012974 (Archaeplastida) Phylogenetic Tree(s): OG0012974_tree ,
OG_05_0000789 (LandPlants) Phylogenetic Tree(s): OG_05_0000789_tree ,
OG_06_0000692 (SeedPlants) Phylogenetic Tree(s): OG_06_0000692_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01004902001
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AT4G22760 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
LOC_Os08g06490.2 No alias Pentatricopeptide repeat-containing protein At4g22760... 0.08 Archaeplastida
Solyc10g006730.1.1 No alias Pentatricopeptide repeat-containing protein At4g22760... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 86 114
IPR002885 Pentatricopeptide_repeat 116 140
IPR002885 Pentatricopeptide_repeat 321 346
IPR002885 Pentatricopeptide_repeat 247 294
IPR002885 Pentatricopeptide_repeat 51 84
IPR002885 Pentatricopeptide_repeat 146 194
No external refs found!