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  5. GSVIVT01004976001

GSVIVT01004976001


Description : NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Vitis vinifera


Gene families : OG0001744 (Archaeplastida) Phylogenetic Tree(s): OG0001744_tree ,
OG_05_0005155 (LandPlants) Phylogenetic Tree(s): OG_05_0005155_tree ,
OG_06_0005637 (SeedPlants) Phylogenetic Tree(s): OG_06_0005637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01004976001
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00157590 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
ATCG01050 NDHD NADH-Ubiquinone/plastoquinone (complex I) protein 0.07 Archaeplastida
ATMG00580 NAD4 NADH dehydrogenase subunit 4 0.03 Archaeplastida
LOC_Os06g46435.1 No alias component NdhD of NDH membrane subcomplex M 0.09 Archaeplastida
LOC_Os07g22504.1 No alias component NdhD of NDH membrane subcomplex M 0.12 Archaeplastida
LOC_Os12g34094.1 No alias NADH-ubiquinone oxidoreductase chain 4 OS=Triticum... 0.03 Archaeplastida
Mp5g13050.1 No alias NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.05 Archaeplastida
Mp8g02440.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc00g013180.1.1 No alias NADH-ubiquinone oxidoreductase chain 4 OS=Brassica... 0.06 Archaeplastida
Solyc00g500171.1.1 No alias NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis... 0.06 Archaeplastida
Solyc00g500172.1.1 No alias NADH-ubiquinone oxidoreductase chain 4 OS=Brassica... 0.04 Archaeplastida
Solyc00g500188.1.1 No alias NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis... 0.06 Archaeplastida
Solyc00g500189.1.1 No alias NADH-ubiquinone oxidoreductase chain 4 OS=Brassica... 0.04 Archaeplastida
Solyc00g500252.1.1 No alias NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis... 0.06 Archaeplastida
Solyc00g500253.1.1 No alias NADH-ubiquinone oxidoreductase chain 4 OS=Brassica... 0.04 Archaeplastida
Solyc01g065585.1.1 No alias NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.04 Archaeplastida
Solyc01g065610.1.1 No alias NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.07 Archaeplastida
Solyc01g065640.3.1 No alias NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.04 Archaeplastida
Solyc02g011750.1.1 No alias NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.04 Archaeplastida
Solyc10g045765.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc10g047420.3.1 No alias NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.06 Archaeplastida
Solyc11g021213.1.1 No alias NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.04 Archaeplastida
Solyc11g021215.1.1 No alias NAD(P)H-quinone oxidoreductase chain 4, chloroplastic... 0.04 Archaeplastida
Solyc11g044600.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009123 nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009141 nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0046034 ATP metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!