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  5. GSVIVT01005023001

GSVIVT01005023001


Description : Carbohydrate metabolism.starch metabolism.degradation.dephosphorylation.SEX4-type phosphoglucan phosphatase


Gene families : OG0001729 (Archaeplastida) Phylogenetic Tree(s): OG0001729_tree ,
OG_05_0008339 (LandPlants) Phylogenetic Tree(s): OG_05_0008339_tree ,
OG_06_0009307 (SeedPlants) Phylogenetic Tree(s): OG_06_0009307_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01005023001
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
AT3G52180 ATSEX4,... dual specificity protein phosphatase (DsPTP1) family protein 0.11 Archaeplastida
Cpa|evm.model.tig00020904.137 No alias No description available 0.02 Archaeplastida
Cpa|evm.model.tig00021719.24 No alias Phosphoglucan phosphatase LSF2, chloroplastic... 0.02 Archaeplastida
Cre09.g403050 No alias Carbohydrate metabolism.starch... 0.02 Archaeplastida
Mp1g21210.1 No alias phosphoglucan phosphatase (SEX4) 0.08 Archaeplastida
Pp3c11_24300V3.1 No alias dual specificity protein phosphatase (DsPTP1) family protein 0.05 Archaeplastida
Pp3c16_260V3.1 No alias dual specificity protein phosphatase (DsPTP1) family protein 0.05 Archaeplastida
Pp3c7_1040V3.1 No alias dual specificity protein phosphatase (DsPTP1) family protein 0.03 Archaeplastida
Solyc03g111160.3.1 No alias phosphoglucan phosphatase (SEX4) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEA Interproscan
BP GO:0016311 dephosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004645 phosphorylase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0008184 glycogen phosphorylase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000340 Dual-sp_phosphatase_cat-dom 137 231
IPR032640 AMPK1_CBM 252 337
No external refs found!