GSVIVT01005747001

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.ERF-type transcription factor

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0090031 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01005747001
Cluster	HCCA: Cluster_13

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00268280	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00010p00194910	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00021p00185480	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00023p00044590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00034p00206140	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
AMTR_s00051p00204250	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00077p00141890	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G22190	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G78080	RAP2.4	related to AP2 4	0.03	Archaeplastida
AT2G44840	ATERF13, ERF13, EREBP	ethylene-responsive element binding factor 13	0.03	Archaeplastida
AT2G44940	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G11140	CRF1	cytokinin response factor 1	0.04	Archaeplastida
AT5G61590	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G64750	ABR1	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G67190	DEAR2	DREB and EAR motif protein 2	0.03	Archaeplastida
Cre14.g620500	No alias	No description available	0.02	Archaeplastida
GSVIVT01017315001	No alias	Cell wall.cutin and suberin.biosynthesis...	0.03	Archaeplastida
Gb_03782	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_07476	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_08035	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_23321	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_32995	No alias	Ethylene-responsive transcription factor ERF016...	0.02	Archaeplastida
Gb_35633	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os02g10760.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
LOC_Os02g43970.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os03g08490.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os03g08500.2	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os04g46400.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os04g46410.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os05g41780.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os11g13840.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10274g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc01g090370.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc02g077370.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc02g077840.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g005500.1.1	No alias	transcription factor (ERF). transcription factor (DREB)	0.03	Archaeplastida
Solyc04g080910.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc05g051180.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc06g051840.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc06g063070.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc08g078170.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc09g089930.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc11g011750.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc12g056590.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e006982_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e007205_P001	No alias	Dehydration-responsive element-binding protein 1E...	0.02	Archaeplastida
Zm00001e008306_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e009947_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e013685_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e015430_P001	No alias	Dehydration-responsive element-binding protein 1G...	0.02	Archaeplastida
Zm00001e019567_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e021579_P001	No alias	Pathogenesis-related genes transcriptional activator...	0.02	Archaeplastida
Zm00001e024001_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e026989_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e027351_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e029041_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e029765_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e031438_P002	No alias	Ethylene-responsive transcription factor RAP2-3...	0.03	Archaeplastida
Zm00001e031497_P001	No alias	Ethylene-responsive transcription factor ABI4 OS=Oryza...	0.03	Archaeplastida
Zm00001e031783_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e032033_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e040033_P001	No alias	No annotation	0.02	Archaeplastida
Zm00001e041620_P002	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e041781_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Neighborhood
CC	GO:0009521	photosystem	IEP	Neighborhood
CC	GO:0009522	photosystem I	IEP	Neighborhood
BP	GO:0009719	response to endogenous stimulus	IEP	Neighborhood
BP	GO:0009725	response to hormone	IEP	Neighborhood
BP	GO:0009733	response to auxin	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
BP	GO:0015979	photosynthesis	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
CC	GO:0044436	thylakoid part	IEP	Neighborhood
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
CC	GO:0098796	membrane protein complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	2	51

External Links

No external refs found!

GSVIVT01005747001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation