1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01005751001

GSVIVT01005751001


No description available


Gene families : OG0000459 (Archaeplastida) Phylogenetic Tree(s): OG0000459_tree ,
OG_05_0000294 (LandPlants) Phylogenetic Tree(s): OG_05_0000294_tree ,
OG_06_0002395 (SeedPlants) Phylogenetic Tree(s): OG_06_0002395_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01005751001
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
AT2G01190 No alias Octicosapeptide/Phox/Bem1p family protein 0.05 Archaeplastida
AT4G05150 No alias Octicosapeptide/Phox/Bem1p family protein 0.02 Archaeplastida
AT5G64430 No alias Octicosapeptide/Phox/Bem1p family protein 0.03 Archaeplastida
LOC_Os07g37040.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g25780.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_201252g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_8420667g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g106320.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc04g007460.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e016191_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000270 PB1_dom 24 104
No external refs found!